| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_1541 |
|---|
| Symbol | |
|---|
| ID | 4034472 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter cryohalolentis K5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007969 |
|---|
| Strand | - |
|---|
| Start bp | 1895032 |
|---|
| End bp | 1895937 |
|---|
| Gene Length | 906 bp |
|---|
| Protein Length | 301 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637974006 |
|---|
| Product | LysR family transcriptional regulator |
|---|
| Protein accession | YP_580804 |
|---|
| Protein GI | 93006367 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG0583] Transcriptional regulator |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 0.827921 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 9 |
|---|
| Fosmid unclonability p-value | 0.805114 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGGACAAT TAGAAGACAT GGCAATGTTT GTACGCATTG TTGAAGCCGG TAGCATTACC
AAGGCTGCCG AACAACTAAA TATTGCCAAA TCAGCGGTTA GCCGTCGCCT CAAGGATTTA
GAGACGCGGT TAGGCAGTCA ACTTATTAGC CGCACCACGC GCCAATCCAA CTTAACCCAA
GCCGGTGAGC AGTATTACCA AAAGGTGAAC AATATACTGA GCGAAGTTGA CGCCCTAAAC
GAAGAAACCA GTGGTGCGCC TACGCGTATC GAGGGCATCT TAAAAATGAC CGCGCCATTG
TCATTTGGCT TGATGCATCT AAATGATGTC ATTGATGAAT ATGCCAATCA GCATCCCAAT
TTGAACTTTG AGCTCGATTT CTCTGATCGG CATACAGATT TGGTTGAAGA AGGGTTTGAA
TTGGGGATTC GTATTAGAGA ACTGCAGGAC TCGAGCTATC AAGCCAAACG TCTGGCGCTA
ATTCGCTATA CCTTATGTGC CAGCCCTGAA TATTTGAGTA AAATGGGCAC ACCAACTACC
CTAGAAGATT TTGCCAAGCA TGAGTTTTTA CAATACGGTC TAAACAAATC CAGCACGATA
GAGCTCATAG ACGAGCAAGG TAAAAAGCAC CAAGTCGCTA TCAACTCAAA GATAAAGGTC
AATAATGGCG ACTTTTTACG AGAAATGGCG GTAAAAGGTC ATGGAATCGC TTTTTTGCCC
AATTTTATTA CTTACAAAAC CTTAGCCAGT GGTGCACTTG TGCCCATCAT GCAGCAGTAT
CAATTGCCGA CTTTAAATGC TTATGCTGTT TATCCCAAAA ACCGATTTTT ATCGCAGCGC
TGCCGTTATC TAATCGATTT TATCGCTGAG CGTTTTGGCG ATGATCCTTA TTGGGATCGT
TTTTAA
|
|---|
| Protein sequence | MGQLEDMAMF VRIVEAGSIT KAAEQLNIAK SAVSRRLKDL ETRLGSQLIS RTTRQSNLTQ
AGEQYYQKVN NILSEVDALN EETSGAPTRI EGILKMTAPL SFGLMHLNDV IDEYANQHPN
LNFELDFSDR HTDLVEEGFE LGIRIRELQD SSYQAKRLAL IRYTLCASPE YLSKMGTPTT
LEDFAKHEFL QYGLNKSSTI ELIDEQGKKH QVAINSKIKV NNGDFLREMA VKGHGIAFLP
NFITYKTLAS GALVPIMQQY QLPTLNAYAV YPKNRFLSQR CRYLIDFIAE RFGDDPYWDR
F
|
|---|
| |