| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_1533 |
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| Symbol | |
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| ID | 4034638 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter cryohalolentis K5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007969 |
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| Strand | - |
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| Start bp | 1883503 |
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| End bp | 1885290 |
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| Gene Length | 1788 bp |
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| Protein Length | 595 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 637973997 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_580796 |
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| Protein GI | 93006359 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.223548 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 0.768195 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTGCTC AACAGTATTC GATAGTAATT GATTTGCGTT GGTGCCTTGA TGAGTTGCTG
GCAGATCGAG TGATAGACCA ACGGGGTTAT AATCTCGTCA TTACCAGCCG CCGCAGTAAG
GGTCAGCATC CGCTATTGAC TATAAGTGAG TTTGGTCTGC CTAATAGTCA TGCACTTGAT
AATAATACTG AAAATAAATT AACTTTGGCA TGGCTCAATC AATGGTTGGC TGCCAAAGCA
GATATGTCGC TGGTCCGTAT TGACCCGTTA AAAGTCGATG TACCAGCAGT GACGCAGCTC
ATGTCGTTTG AGTATGCACG CTCGCAGCAT ATTTTGCCGA TTGAAGTAAC GCTTGATGAG
GTGGTTATCG GTACCGATCA GCCATTTTAT ACCGATTGGC ATGGCAATAT TGAAAAGCTC
ATTAAGTCAA AAAGCTATCG TACAGTCTTT ATTAATCCTG AACAAATCAA TCGCTATCGG
CAAGAATTTT ACCAAGTCAC GCAAGCGATT GCAGGGGCGA ACTCACTACA TAAACGTGCC
GCATCTGATA TCACTAATGT TGAAGCACTA TTACAGCTAG GGGACAATAC CAACCCCGAT
GCCAATGACC AACATATTGT CAAAGTCGTC GATTGGTTGT TGCAATATGC CTTTGAGCAG
CGCGCCAGTG ATATCCATTT AGAGCCACGT CGTGAGACGG GCAAGGTGCG TTTTCGCATT
GATGGGGTGC TGCATAGTGT TTATGAGATG CCACTCGCTA TTATAGTGGC GGTAACGGCA
CGTATTAAAA TCTTGGGACG GCTCAATGTT GCAGAAAAAC GCAAACCACA AGACGGGCGA
CTAAAAACAC GTACACCAAA AGGCTTAGAG ACGGAGCTGC GTTTATCCAC GATGCCGACT
GCCTTTGGTG AAAAGTTGGT TATGCGGGTA TTTGACCCTG AGGTACTAGT ACGCTCCTTT
GCTCAGCTTG GTTTGTCAGG TAAGCAGCTG GAGACTTGGC ACGAGCTGAC AGCGCATCCA
AACGGTATTA TTCTAGTGAC AGGTCCAACA GGTTCGGGTA AAACGACTAC CTTATATAGT
ACGCTGAAGC AGCTCGCCAC TGAACAAGTA AACGTCTGTA CCATTGAAGA TCCGATTGAG
ATGATTGAGT CAGCATTTAA TCAAATGCAG GTTAATCCAG GAGTTGATTT ACATTTCGCT
GATGGTATTC GCTCTTTGAT GCGTCAAGAC CCTGATATTA TTATGGTTGG TGAGATTCGT
GATGCTGAAA CGGCAAACAT GGCGGTACAA GCATCTTTAA CAGGGCATTT GGTGCTCTCA
ACCTTGCATA CCAATGATGC GCCAAGTTCA ATTACTCGAC TGCACGATTT GGGTATTCAG
CCTTTTTTGA CGTCAGCAAC GATATTGGGC ATCATGGCAC AACGTTTATT ACGGACATTA
TGTCCACATT GTAAGCAAGC CGTGGATGTT ACGGCAGATA GCGAGATTGC CATTCAATGG
CAAGAATTAG TACAGCCGTG GCGCGCGTCC GTGCCAGCGC AGATTTATAA GGCACAGGGT
TGCGAGCATT GCCGCCATAC TGGTTATCAA GGTCGTATTG GTCTTTATGA GATTATGCCA
TTATCAAATG AGTTGAAAAA ACTGGTCGCT GCTGATGCCA ATCTGGATGT ATTAAAGCAG
CAAGCATACC GTGAAGGCGT ACAGCCATTA CGCCTATCAG GTGCGAAGCG TATTAGTGAA
GGGGTAACGA CCATGGAAGA GGTGATGCGC GTGGTACCTT TGCATTAG
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| Protein sequence | MPAQQYSIVI DLRWCLDELL ADRVIDQRGY NLVITSRRSK GQHPLLTISE FGLPNSHALD
NNTENKLTLA WLNQWLAAKA DMSLVRIDPL KVDVPAVTQL MSFEYARSQH ILPIEVTLDE
VVIGTDQPFY TDWHGNIEKL IKSKSYRTVF INPEQINRYR QEFYQVTQAI AGANSLHKRA
ASDITNVEAL LQLGDNTNPD ANDQHIVKVV DWLLQYAFEQ RASDIHLEPR RETGKVRFRI
DGVLHSVYEM PLAIIVAVTA RIKILGRLNV AEKRKPQDGR LKTRTPKGLE TELRLSTMPT
AFGEKLVMRV FDPEVLVRSF AQLGLSGKQL ETWHELTAHP NGIILVTGPT GSGKTTTLYS
TLKQLATEQV NVCTIEDPIE MIESAFNQMQ VNPGVDLHFA DGIRSLMRQD PDIIMVGEIR
DAETANMAVQ ASLTGHLVLS TLHTNDAPSS ITRLHDLGIQ PFLTSATILG IMAQRLLRTL
CPHCKQAVDV TADSEIAIQW QELVQPWRAS VPAQIYKAQG CEHCRHTGYQ GRIGLYEIMP
LSNELKKLVA ADANLDVLKQ QAYREGVQPL RLSGAKRISE GVTTMEEVMR VVPLH
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