| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_1528 |
|---|
| Symbol | |
|---|
| ID | 4034633 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter cryohalolentis K5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007969 |
|---|
| Strand | - |
|---|
| Start bp | 1879433 |
|---|
| End bp | 1880308 |
|---|
| Gene Length | 876 bp |
|---|
| Protein Length | 291 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637973992 |
|---|
| Product | general secretion pathway protein J |
|---|
| Protein accession | YP_580791 |
|---|
| Protein GI | 93006354 |
|---|
| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
|---|
| COG ID | [COG4795] Type II secretory pathway, component PulJ |
|---|
| TIGRFAM ID | [TIGR01711] general secretion pathway protein J
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 11 |
|---|
| Plasmid unclonability p-value | 0.81636 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGAAATCGC AGCATGGATT TACCTTACTT GAGCTGATGG TCGCCATGGC AATATTTGCG
ATGCTAGCAG TGGCAGGCTG GCAGGTGTTT GATAGCGTCA ACCGTGCTCG AGAACGTGCC
CAGTTCCATG CAGATAATTT AGCCGTTTTG CAATATGCTT ATCTGCAGCT ACAGCAAGAT
ATGGGGCAAA TCGTTCCTTA TCAAGCAGTA AATACTCAAA GTGCCAGTGC TTCAAATGTT
GATAATGCAA ATAATAGCAA TCAAGAAAAT GTACTACAGC CGATGCCTGA ACCTTTTATG
AGTTTGGATA GTGCGCGTAT CAGCTTTGTC CGTTTTGCTG ATCCTGATCC TCGATATCAA
AGCAGTCCTA GTATGCAGCA TGTCGAATAT ATTTTTGCTG ATGAGCGTTT GATTCGCCGT
CAATATGCCA GTATAGGCGG AGGTAGTGAT AGCATCAGCT TGGACAGTGT CTTGCTTGAA
GGGGTGACAG CAGGGCAATG GCAAGCGTAT CTGCCAGAAA TGAGTACAAA GTTTCCCAAT
GAAGACAGTA ATAGTAACAA TGCCAGCTTG AATAGCCAAT TTGGACAAGG GGCGGCGTCA
ACCACTGCTC AGCCTGAGAG TGTGCTGCTA CCGAAAGGAG TTGCTATCAC TTTCACTTAT
CAAGATATGC CGATTACCTG GCAGTGGGCG CTTGCTCCGC AGCCAATACC AAATAATAGT
GCCAATAAAA ATAATACTCC TGATAATTCT AACGGCAACG GCAACGGCAA CGGCAACGGC
AACGGCAACG GCAACGGCAA CGGCAATAGT AATGGCGCAA GTAACAATGA TGCAGCCAAT
GGCAATGTAG ATAATAATTC AGGGAATGGA ATTTAA
|
|---|
| Protein sequence | MKSQHGFTLL ELMVAMAIFA MLAVAGWQVF DSVNRARERA QFHADNLAVL QYAYLQLQQD
MGQIVPYQAV NTQSASASNV DNANNSNQEN VLQPMPEPFM SLDSARISFV RFADPDPRYQ
SSPSMQHVEY IFADERLIRR QYASIGGGSD SISLDSVLLE GVTAGQWQAY LPEMSTKFPN
EDSNSNNASL NSQFGQGAAS TTAQPESVLL PKGVAITFTY QDMPITWQWA LAPQPIPNNS
ANKNNTPDNS NGNGNGNGNG NGNGNGNGNS NGASNNDAAN GNVDNNSGNG I
|
|---|
| |