Gene Pcryo_1517 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_1517 
Symbol 
ID4034276 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp1864354 
End bp1865838 
Gene Length1485 bp 
Protein Length494 aa 
Translation table11 
GC content47% 
IMG OID637973981 
Productmethylmalonate-semialdehyde dehydrogenase 
Protein accessionYP_580780 
Protein GI93006343 
COG category[C] Energy production and conversion 
COG ID[COG1012] NAD-dependent aldehyde dehydrogenases 
TIGRFAM ID[TIGR01722] methylmalonic acid semialdehyde dehydrogenase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCACCACG TCAAGCAGCT CATCAATGGT CAATTTGTTG ATTCTAATAC TAGCGAATGG 
ATTGATATTA CCGATCCTGC CACTCAAGAA GTCATTGCCA AGGTACCGCA AACGACAGAC
GATGAAATCA ATCAAGCAGT CGCTGCCGCT CAAACGGCTT TTCAAACGTG GCGTAAAACA
CCAATTACCA CTCGTGCTCG TATCTTTTTA AAGTACCAAG CACTGATTCG CGACCATATG
GATGAATTAG CAGAGATCTT GACTGCAGAG CAGGGCAAGA CCATTGCTGA TGCGCGTGGT
GATGTATTCC GAGGTTTAGA GGTAGTCGAG CATGCAGCAG GCATTGCAAA CCTGCAGATT
GGGGACTTTG TTGAAAACGT TGCATCAGGT GTTGATACTT ACAGTATTTG GCAGCCACTT
GGTGTTTGTG CAGGCATTAC GCCGTTCAAC TTCCCAGCGA TGATTCCACT GTGGATGTTT
CCAATGGCGA TTGCCACGGG TAATACTTTT ATCTTAAAAC CTTCTGAACA AGATCCGATG
GTGACCATGC GTTTGGTTGA ACTTGCGGTT GAAGCGGGTG TGCCTGAAGG AGTGCTAAAC
GTCGTACATG GCGGCAAAGC CACCGTTGAT GCGATTTGTG ATCATCCTGA TATTAAAGCA
GTTTCTTTTG TCGGTTCGAC CAATGTCGGC AAACATGTTT ATGAGCGTGC CAGTCAATCA
GGCAAACGTG CTCAGTGTAT GATGGGCGCA AAAAACCATG GCGTTATCTT GCCGGATGCC
AATAAAGAGC AGACTCTTAA TCAGCTAGCA GGTGCCGCAT TTGGTGCTGC CGGTCAGCGT
TGTATGGCAC TGTCTGTCGT TGTCCTTGTC GGTGCTGCTG GTGAGTGGAT TGATGACATC
AAGGCCAAAG CAGAAGGTTT AATCGTCTCA GCCGGTAAGC ACGATAAAGA TTTGGGTCCA
CTGATTTCTC CTGCAGCAAA AGCGCGTGTT GAGCATTTGA TTGGTACTGG TGTAGAAGAG
GGAGCCAGTC TATTGCTTGA TGGTCGTGGT ATTACGGTTG AAGGGTATGA GAAAGGCAAC
TTCGTTGGTC CAACTATCTT TGATAACGTC ACAAGCGACA TGCAAATTTA CAAAGAAGAA
ATCTTTGGAC CTGTACTGTG CATCATGCGT GCCAATAGCT TAGATGAGGC AATTGAGCTG
CTCAATGCCA ACCCGCATGG TAATGGTACC GCTATCTTTA CTCAGTCAGG GGCTGCCGCG
CATAAGTTCC AGCAAGATAT CCAAGTCGGT CAAATCGGTA TTAACTTGCC AATTCCTGTG
CCACTACCGA TGTTCTCGTT TTCAGGCTCA CGTGCTAGTA AGCTTGGTGA TTTAGGTCCT
TATGGTAAGC AAGCGGTGCA ATTTTATACC CAAACTAAAA CCGTTACGGC ACGCTGGTTT
GATGATGAGG CAAGTCGCGG TGTCAATACG ACTATTTCAA TTTAA
 
Protein sequence
MHHVKQLING QFVDSNTSEW IDITDPATQE VIAKVPQTTD DEINQAVAAA QTAFQTWRKT 
PITTRARIFL KYQALIRDHM DELAEILTAE QGKTIADARG DVFRGLEVVE HAAGIANLQI
GDFVENVASG VDTYSIWQPL GVCAGITPFN FPAMIPLWMF PMAIATGNTF ILKPSEQDPM
VTMRLVELAV EAGVPEGVLN VVHGGKATVD AICDHPDIKA VSFVGSTNVG KHVYERASQS
GKRAQCMMGA KNHGVILPDA NKEQTLNQLA GAAFGAAGQR CMALSVVVLV GAAGEWIDDI
KAKAEGLIVS AGKHDKDLGP LISPAAKARV EHLIGTGVEE GASLLLDGRG ITVEGYEKGN
FVGPTIFDNV TSDMQIYKEE IFGPVLCIMR ANSLDEAIEL LNANPHGNGT AIFTQSGAAA
HKFQQDIQVG QIGINLPIPV PLPMFSFSGS RASKLGDLGP YGKQAVQFYT QTKTVTARWF
DDEASRGVNT TISI