| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_1494 |
|---|
| Symbol | |
|---|
| ID | 4034462 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter cryohalolentis K5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007969 |
|---|
| Strand | - |
|---|
| Start bp | 1837207 |
|---|
| End bp | 1838451 |
|---|
| Gene Length | 1245 bp |
|---|
| Protein Length | 414 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637973958 |
|---|
| Product | tRNA delta(2)-isopentenylpyrophosphate transferase |
|---|
| Protein accession | YP_580757 |
|---|
| Protein GI | 93006320 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0324] tRNA delta(2)-isopentenylpyrophosphate transferase |
|---|
| TIGRFAM ID | [TIGR00174] tRNA isopentenyltransferase (miaA) |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 5 |
|---|
| Plasmid unclonability p-value | 0.03579 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 14 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCATCA AAGGCAAGTA TATGCGACTT TCGTCTGATA GCCTATCTTC TTACTTAAGT
CCCAATTTGG CGGACAATAG CGTGGTGTGC TTGATGGCAC CAACCGCGAG TGGTAAGACT
GCTTTGGCTT ACGAGCTTTA TAATAGCGGT CGTTATGAGC TGATTTCGGT AGATTCAGCA
TTGGTGTATC GTGACATGAC GGTCGGTACC GCAAAACCAA ACGCTGCTGA GCTGGCACGA
TACCCTCATC ATTTGGTCGA TATCATTGAT CCTATGCAAA GCTATAGTGT CGCTGAGTTT
GTCAACGATG TGGCAAGATT GATTGATAGC TGTCATCAGA ATGGCAAAAT ACCCTTGTTG
GTCGGCGGTA CGATGATGTA TTACATGGCA TTACTCGACG GACTCTCACC AGTGCCTGAT
AGTGATGACA GTGTTCGCGC GCGCGTTGAG CAGTGGCGCC AAGATGAGGG TATCAGTGCG
CTATATGATT ATCTTGGTAA AGTTGATGCT ATCAGCCATG AGCGTCTTAA TGCAACTGAT
ACCCAGCGTA TTACCCGTGC TGTTGAAGTA TATTTGCAAA CTGATATTCC TATTAGTGAC
TGGCAGCGTC AGCCCAAGCA AGCATTGGCA TATAATCCCA ATCAGCAATG GCATGCTTTG
GCGGTTATGC CAGATCGTCC ATGGTTGCAT ACGCGTATTG AGCAGCGATT AGATATCATG
TGGCGTGAAG GGTTAGTAGC AGAGGTTATC AGTTTGCTTG AGCATTATCC TTTGACCCCA
GGCTTACCTT CGATGCGCTG TGTTGGTTAT CGACAAGTAT TAGAGTATTT GGTACAGACT
AATCACCCTG TATTTGAACA GCCTCATTTG GATAAAGCGC AGTTTTATGA TGCTTTTGCT
CAATCGGAAC CATCAAGTAA CGAAAGTAAA GAGCAAGATA CCACGATTCA AAGTAGCATA
ACTCAGACGC ATCTACCAAT GGCAACTGCC CAAACCGAAG CGCTTGCTTG TCAGCAAATG
CAAAATAAGG CATTATATGC TACAAGGCAG TTAGCAAAGC GCCAATACAC GTGGCTGCGA
AAAGTGATGC AACTGTCTAA TACGGCAGCA GTGCCTACAA CAGAATCAAT AACAGCGTCG
TCGACATCCA CTGTTGGCTC TGATGATGTG ACAGATTTTC AAAAAAATAA GTTAATATTG
CACTCATTTA GCACTATGGA GCAGGCGAGA GCGTATTTGG TTTAA
|
|---|
| Protein sequence | MTIKGKYMRL SSDSLSSYLS PNLADNSVVC LMAPTASGKT ALAYELYNSG RYELISVDSA
LVYRDMTVGT AKPNAAELAR YPHHLVDIID PMQSYSVAEF VNDVARLIDS CHQNGKIPLL
VGGTMMYYMA LLDGLSPVPD SDDSVRARVE QWRQDEGISA LYDYLGKVDA ISHERLNATD
TQRITRAVEV YLQTDIPISD WQRQPKQALA YNPNQQWHAL AVMPDRPWLH TRIEQRLDIM
WREGLVAEVI SLLEHYPLTP GLPSMRCVGY RQVLEYLVQT NHPVFEQPHL DKAQFYDAFA
QSEPSSNESK EQDTTIQSSI TQTHLPMATA QTEALACQQM QNKALYATRQ LAKRQYTWLR
KVMQLSNTAA VPTTESITAS STSTVGSDDV TDFQKNKLIL HSFSTMEQAR AYLV
|
|---|
| |