Gene Pcryo_1457 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_1457 
Symbol 
ID4033905 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp1797249 
End bp1797905 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content37% 
IMG OID637973921 
ProductSel1 
Protein accessionYP_580720 
Protein GI93006283 
COG category[R] General function prediction only 
COG ID[COG0790] FOG: TPR repeat, SEL1 subfamily 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCTTTT CTAAGTCTAA AATGACAACT ACCCTTCTTT TTCTTTTATC TTCACCATTT 
TTGTTGATGG GTTGCCAACA AATTCAAAGT GCAACTAATC AACAAGCTTT ACAGACGCAA
TTGAAGGTTA AGAAAGAAAG TGATGTTGCA AAGCTACAAA GACTGGCAGA ACAAGGCGAT
GTAAAATCGC AGTTTAATCT TGCCGAGAGA TATAGAGAAG GTATAGAAAT AAATATAGAT
TGTGACAAAG CAACCTATTG GTACAATAAA GCAGCTAATG AAGGAGATAT AGCGGCTCAG
TCCAACTTAG GCGTCATGTA CAGTCTAGGT TACTGTGTAT CTCAAGACTA TAATAAAGCA
GTATATTGGT ACACGAAAGC AGCTGATCAA GGAGACGTAG CGGCTCAGTT CACTCTAGGT
GACTTATACC ACAAAGGTTA TGGTGTGCCG CAAGATTATA ATAAAGCAAT TTATTGGTAC
ACAAAAGCAG CTAGTCAAGA CTATCCATTT GCTCAATATG CTATAGCCAC TATGTACGAA
AAAGGTCAGG GCGTACGTCA AGATTATGCT ATTGCTAAAG AATGGTATGA CAAAGCATGT
GATATTGGAT TTCAATCATC AGGTTGCGAT GAATATAAGA CTAATTATAG TAAATAA
 
Protein sequence
MIFSKSKMTT TLLFLLSSPF LLMGCQQIQS ATNQQALQTQ LKVKKESDVA KLQRLAEQGD 
VKSQFNLAER YREGIEINID CDKATYWYNK AANEGDIAAQ SNLGVMYSLG YCVSQDYNKA
VYWYTKAADQ GDVAAQFTLG DLYHKGYGVP QDYNKAIYWY TKAASQDYPF AQYAIATMYE
KGQGVRQDYA IAKEWYDKAC DIGFQSSGCD EYKTNYSK