Gene Pcryo_1456 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_1456 
SymbolksgA 
ID4033904 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp1795890 
End bp1796753 
Gene Length864 bp 
Protein Length287 aa 
Translation table11 
GC content46% 
IMG OID637973920 
Productdimethyladenosine transferase 
Protein accessionYP_580719 
Protein GI93006282 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0030] Dimethyladenosine transferase (rRNA methylation) 
TIGRFAM ID[TIGR00755] dimethyladenosine transferase 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCAAAAA CTACATTTGA TGCTCAATCT ATTACCAACA GCCTACGTGC TGCCAAACAC 
CAACCGCGTA AACGCTTTGG TCAAAACTTC TTACATGACC GTAGTGTTAT CCGTGAGATT
GTTGAGAGCA TTCGCTTAGA GCGTGATGAC AATTTGATTG AGATTGGGCC AGGGATGGGC
GCACTGACTG AGCCGTTATT GGCAGAAGTA GATGCGATGA CTGTAGTCGA GTTGGATCGT
GATTTGGCAG ATAGCTTGCG TATCCGTATC GGGGCTAATA GTCATCCAAA TTTTGAGATT
ATCAAAAACA ATGCCATGCA TGTGGATTAT CGGGAGCTTT ATAGCGATGA GCGCGGCAAA
TTACGCGTGG TGGGTAATCT ACCGTATAAC ATCTCAACGC CCATACTCTT TCACTTACTC
AGCTATGCCG ATGTGATTGA AGACATGCAC TTTATGCTGC AAAAAGAAGT GGTTGAACGT
ATCACCGCTG ACGTCGGTAG CAAAACCTAT GGTCGCCTAT CGGTCATTAT GCAGTACCAC
TGCCATACGG ATTATTTGCT CACCGTACCA CGTGGTGCTT TTAATCCGCC GCCAAAAGTG
ACCAGTGCCG TATTTCGTCT GACGCCGCAC ATTATTAAGC CAGTCGTGGC AGAAGATGAA
GAGTATTTTG CATTGGTAGT GCGCGAAACC TTTAATCATC GCCGTAAAAC GTTGCGCGCT
ATATTCAAAA AATCAACGTT ATTGCCAACG TTGAGCGAAG ACGATTTTGC AGCTTGCGCC
ATTGATCCAC AAGCCCGTCC TGAAACCTTA AGCGTGAAAG ATTTTGTCAA TTTGAGCAAT
CAAGCGCGTA AAGTAGAAGG CTGA
 
Protein sequence
MSKTTFDAQS ITNSLRAAKH QPRKRFGQNF LHDRSVIREI VESIRLERDD NLIEIGPGMG 
ALTEPLLAEV DAMTVVELDR DLADSLRIRI GANSHPNFEI IKNNAMHVDY RELYSDERGK
LRVVGNLPYN ISTPILFHLL SYADVIEDMH FMLQKEVVER ITADVGSKTY GRLSVIMQYH
CHTDYLLTVP RGAFNPPPKV TSAVFRLTPH IIKPVVAEDE EYFALVVRET FNHRRKTLRA
IFKKSTLLPT LSEDDFAACA IDPQARPETL SVKDFVNLSN QARKVEG