| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_1433 |
|---|
| Symbol | |
|---|
| ID | 4035212 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter cryohalolentis K5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007969 |
|---|
| Strand | - |
|---|
| Start bp | 1761232 |
|---|
| End bp | 1763064 |
|---|
| Gene Length | 1833 bp |
|---|
| Protein Length | 610 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637973897 |
|---|
| Product | extracellular solute-binding protein |
|---|
| Protein accession | YP_580696 |
|---|
| Protein GI | 93006259 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG4166] ABC-type oligopeptide transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.569191 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCTAAAAA ATACCATGCT AAAAACTGTC CTATTAGTGA CCATGGCGAG CTGGATACCA
GCCAGTATCG CGGTGCCGAT CACTACTACT GCGCTTGGTC ATAATAGTCC TACTGAATAT
ATCGACGCCC CATTTATGCC GTATGCCAAT CCAAATGCGC CCACCGGTGG CACGTTGTCG
CTTGATGCGC GCGGTACTTT TAATGCGGCT AATAAATGGA TGACGACGGG GGTAGCAATG
GCTGGCACCG ACTATCTATA TGATACCTTG ATGACTGGCT CATTAAATGA AGCTTTTACC
ATGTATCCGC AGCTGGCAAG TAAGGTCACT TATGACCCTG ATGATACCAG CTGGATTATT
TATCATATCA ATCCTGCCGC ACGCTTTTGG GATGGATCAT TGGTGACCAG TCATGATGTA
AAAGCCACTT ACGACGCGAT ACTGAACAAA GGGCCGATGT ATATTCGCAG CTATTTGGGG
GATATTAAAG ACATTCAGAT TATTAATAAA CAGCAAGTAA AATTTGTTTT TGCCTCTGAT
AAAAATAAAG AGATTTTATT AACGGTTGGT CAATTTCCTA TTTTTGCCAA GTCTTCTATC
GATGCTGATT TTGAAAAAAT TAGCCTAACG CCATTGATGG GTAGCGGTCC TTACAAATTA
GGGCGTGTTG ATGCGGGACG GGCAGTCAGT TATGTGCGTG ATCCCAATTA TTGGGGTCGT
GATTTGATGG TCAATCGTGG TCGTTATAAT TTTGATATGA TTAAGTTTGT CTACTATCAG
AGTGATGAGA TTGCTTTTGA AGGTTTTAAA TCGGGTCAAT ATCGTTTTCG CCCAGAGAAT
AAAGCGTCTA ACTGGGCAAC GGGTTATAAT TTCCCCGCAG TAAAAGCAGG TCTTATTAGT
AAAGAATCAA TAAGCAGTCA AAATCCAGTG CCGATGCAAG CACTTATCAT GAATATGCGT
CGGCCCATCT TTCAAGATAT TCGTGTCCGT CAAGCCTTAA CCGCAGCTTA TGATTTCGAA
TGGATGAATA AAACCTTATT TCATGGGCAG TATGAGCGTT TGCAAAGCTT TTTTCATGGA
TCAGAGCTTG CCGCCACTGG CACGCCGACA GATGCAGAGA TGCAGGTGCT AATTCCATTA
TTATCTAAAC TTGAACCAAT GCAGCGCAAA GCAGTATTAA TGGAGTGGCA GCTGCCAACC
AGTGATGGTA GTGGCTTTAA TCGCGAAGGG TTGTTAAAAG CGCGGCAGCT GTTGCTAGAT
GCTGGATTTT ATTATGAAGA TATGAAGCTG TATCAGCCGG ATGGCAAGCT TGCTCAGATT
GAAATTTTAA TGACAGGCGA AACCATGGGT CGAGTGTTGT TGCCTTATAT TCGTAATCTA
AAGCGTTTAG GCTTTGATGT GACGCTACGC CAAGTGGATG GTGCACAATA TTATGAGCGT
GTGCGTCGTT TCGATTATGA CATGGTAGTC GATGTATTCG CCCAGAGCTT ATCGCCTGGT
GCTGAGCAAG CGGCATTTTG GGGCAGTGCG GCGGCTGATG AGCCTGGTAA TCATAATACG
GCTGGCATAA AAAATACTGC TATCGATACA GTGACAGCGT TGCTTGCCAA TGCTAAAAAC
CGTGATGAGA TTGTACTCTA TACTCAAGTG CTCGATCGCC TGCTGCGTGC AGGTCACTAT
TTGGTGCCAT TATATGGTAA GTCTAGTACC AATGTCGCGT ATTGGAATCA ATACCGTCAT
ACTGAAAAGC TGCCATCTAA TGCCATCGGT ATTGATTACT GGTGGACGGA TAAAAAAGCA
GAAGCACGCG TTAATCAATA TTTAAAACAG TAA
|
|---|
| Protein sequence | MLKNTMLKTV LLVTMASWIP ASIAVPITTT ALGHNSPTEY IDAPFMPYAN PNAPTGGTLS
LDARGTFNAA NKWMTTGVAM AGTDYLYDTL MTGSLNEAFT MYPQLASKVT YDPDDTSWII
YHINPAARFW DGSLVTSHDV KATYDAILNK GPMYIRSYLG DIKDIQIINK QQVKFVFASD
KNKEILLTVG QFPIFAKSSI DADFEKISLT PLMGSGPYKL GRVDAGRAVS YVRDPNYWGR
DLMVNRGRYN FDMIKFVYYQ SDEIAFEGFK SGQYRFRPEN KASNWATGYN FPAVKAGLIS
KESISSQNPV PMQALIMNMR RPIFQDIRVR QALTAAYDFE WMNKTLFHGQ YERLQSFFHG
SELAATGTPT DAEMQVLIPL LSKLEPMQRK AVLMEWQLPT SDGSGFNREG LLKARQLLLD
AGFYYEDMKL YQPDGKLAQI EILMTGETMG RVLLPYIRNL KRLGFDVTLR QVDGAQYYER
VRRFDYDMVV DVFAQSLSPG AEQAAFWGSA AADEPGNHNT AGIKNTAIDT VTALLANAKN
RDEIVLYTQV LDRLLRAGHY LVPLYGKSST NVAYWNQYRH TEKLPSNAIG IDYWWTDKKA
EARVNQYLKQ
|
|---|
| |