Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_1406 |
Symbol | |
ID | 4035801 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | - |
Start bp | 1726096 |
End bp | 1726995 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637973870 |
Product | LysR family transcriptional regulator |
Protein accession | YP_580669 |
Protein GI | 93006232 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.475015 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTTAGATA ATTTACGTGG TATGGCTGTG TTTGCTAGTG TGGTCGGACA CGGCTCCTTT AGTGGTTCAG CCCGTGAGCT TGGTATCACC ACCAGCGCCG TCAGTCAGCA AATACGTTCT TTAGAGAACG AGCTTGGTGT GGTGTTATTA CATCGCTCAA CCCGTAAGCT CAGCTTAACA GAAGCGGGTG CTAGCTTTTA TGAAGCGGCA AAAGATGTGG TAAGTGCGGC AGAGCAAGGT CGAATTAAAG TCAATCAATT ACGTGATGAA TTGGCAGGTA GTTTGCGTAT TGCAACGACC CCAGAGCTTG GTGTCAATCA TATTTTGCCA GCACTATCGA CTTGGATGTC AGCGCACGAT GATCTTAGTA TTACCTATTT TGCAGATAAT AATTATATTG ATATGATTGA TGAGCGAATC GATATTGCGA TACGTATGAG CCCCAATATC AACGACTCAA CTGTGAGCAA TCATCCGTTA TCTGATGTGC GTCAAATGTT GGTCGCTTCA CCACAATATT TACGTCAACA TAAGAAAATT GAAACACCGA AAGATTTGGC GGATCATCAT CTTATCTGTA TTGATATCAT GAAGGATACA AATAATGTTG AGCTGACTCA GACTGAGACT GGTAAAAAAA CACGTATCAA AATGACGTCG CGTATCCATA CCAATAACGT CTTTATGGCA ATGACCATCG CTAAAGAAGG TCATGGTATT CTTAGAATGA TGGAAATGGA TGTCAAAAAA GAGCTAGAAT CGGGTAACTT GGTCGAAGTT CTAACCGGCT ATCAGATGCC AAGTTTTGTA CTATATGCTG TAACCTTAAA TCGTGAGCAA CAGCCTGCAA AAATCACGCG TTGCTTAGAG GTATTAAAAA AATACTTTCA TGCAAACTAA
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Protein sequence | MLDNLRGMAV FASVVGHGSF SGSARELGIT TSAVSQQIRS LENELGVVLL HRSTRKLSLT EAGASFYEAA KDVVSAAEQG RIKVNQLRDE LAGSLRIATT PELGVNHILP ALSTWMSAHD DLSITYFADN NYIDMIDERI DIAIRMSPNI NDSTVSNHPL SDVRQMLVAS PQYLRQHKKI ETPKDLADHH LICIDIMKDT NNVELTQTET GKKTRIKMTS RIHTNNVFMA MTIAKEGHGI LRMMEMDVKK ELESGNLVEV LTGYQMPSFV LYAVTLNREQ QPAKITRCLE VLKKYFHAN
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