Gene Pcryo_1406 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_1406 
Symbol 
ID4035801 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp1726096 
End bp1726995 
Gene Length900 bp 
Protein Length299 aa 
Translation table11 
GC content41% 
IMG OID637973870 
ProductLysR family transcriptional regulator 
Protein accessionYP_580669 
Protein GI93006232 
COG category[K] Transcription 
COG ID[COG0583] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.475015 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAGATA ATTTACGTGG TATGGCTGTG TTTGCTAGTG TGGTCGGACA CGGCTCCTTT 
AGTGGTTCAG CCCGTGAGCT TGGTATCACC ACCAGCGCCG TCAGTCAGCA AATACGTTCT
TTAGAGAACG AGCTTGGTGT GGTGTTATTA CATCGCTCAA CCCGTAAGCT CAGCTTAACA
GAAGCGGGTG CTAGCTTTTA TGAAGCGGCA AAAGATGTGG TAAGTGCGGC AGAGCAAGGT
CGAATTAAAG TCAATCAATT ACGTGATGAA TTGGCAGGTA GTTTGCGTAT TGCAACGACC
CCAGAGCTTG GTGTCAATCA TATTTTGCCA GCACTATCGA CTTGGATGTC AGCGCACGAT
GATCTTAGTA TTACCTATTT TGCAGATAAT AATTATATTG ATATGATTGA TGAGCGAATC
GATATTGCGA TACGTATGAG CCCCAATATC AACGACTCAA CTGTGAGCAA TCATCCGTTA
TCTGATGTGC GTCAAATGTT GGTCGCTTCA CCACAATATT TACGTCAACA TAAGAAAATT
GAAACACCGA AAGATTTGGC GGATCATCAT CTTATCTGTA TTGATATCAT GAAGGATACA
AATAATGTTG AGCTGACTCA GACTGAGACT GGTAAAAAAA CACGTATCAA AATGACGTCG
CGTATCCATA CCAATAACGT CTTTATGGCA ATGACCATCG CTAAAGAAGG TCATGGTATT
CTTAGAATGA TGGAAATGGA TGTCAAAAAA GAGCTAGAAT CGGGTAACTT GGTCGAAGTT
CTAACCGGCT ATCAGATGCC AAGTTTTGTA CTATATGCTG TAACCTTAAA TCGTGAGCAA
CAGCCTGCAA AAATCACGCG TTGCTTAGAG GTATTAAAAA AATACTTTCA TGCAAACTAA
 
Protein sequence
MLDNLRGMAV FASVVGHGSF SGSARELGIT TSAVSQQIRS LENELGVVLL HRSTRKLSLT 
EAGASFYEAA KDVVSAAEQG RIKVNQLRDE LAGSLRIATT PELGVNHILP ALSTWMSAHD
DLSITYFADN NYIDMIDERI DIAIRMSPNI NDSTVSNHPL SDVRQMLVAS PQYLRQHKKI
ETPKDLADHH LICIDIMKDT NNVELTQTET GKKTRIKMTS RIHTNNVFMA MTIAKEGHGI
LRMMEMDVKK ELESGNLVEV LTGYQMPSFV LYAVTLNREQ QPAKITRCLE VLKKYFHAN