| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_1382 |
|---|
| Symbol | |
|---|
| ID | 4034719 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter cryohalolentis K5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007969 |
|---|
| Strand | + |
|---|
| Start bp | 1692424 |
|---|
| End bp | 1693800 |
|---|
| Gene Length | 1377 bp |
|---|
| Protein Length | 458 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637973846 |
|---|
| Product | EmrB/QacA family drug resistance transporter |
|---|
| Protein accession | YP_580645 |
|---|
| Protein GI | 93006208 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG2814] Arabinose efflux permease |
|---|
| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.229793 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGTAGCCC TGACTCCAAC GCAAGATAAA TACCTACCCT ATGTACTGGC GGTAGCGTTA
TTTATGCAAA TTTTAGACGC TACTATTTTA AACACGTCCC TACCACAGAT GGCACAAGCA
TTGGGCGAAT CGCCACTACA AATGCAATGG GCAGTCATCA GCTACGCGCT TACTCTGGCG
ATTTTTATTC CTATTAGCGG ATTTTTAGCC GATAAATATG GCACACGCCG CGTGTTCTTG
TCCGCCATTA TCATATTCTG TATCGGCTCG CTATTATGTG CCGCTTCTCC GACACTAGAC
TTCTTAATAG GCTCACGTAT TGTACAAGCT ATCGGCGGCG CGATGATGAC GCCGGTTGCA
CGCTTGATTT TGGTCAAGTC TTATCCGCGC AATAAGCTCT TAACGGTGAT GAACTTTGCG
GTAATCCCTG CTTTGGTTGC GCCATTGGTC GGACCAGTAT TGGGTGGTTA TATCGTACAG
TACACCAGCT GGCACTGGAT ATTTTTAATC AACATACCCA TGGGTGTTTT TGGTTTTATC
ATGGGCAAAA AACTGGTACC AGCATTGTTT GAGGACACCA AGCGTCTAGA TTGGACAGGG
TTTTTGTTGT TTGCCGCTGC CGCTTGTGGT TTTACCTTGG CGGTAGAATT TGGCGCACAA
GTCGGGCGTG GGTTTTATGG GCTGATGCTT GGATTGCTGG CAAGTCTGTT GCTTGGTGCT
TATATTTGGC ACGCAAAACG TCGTACAGCT CCGCTATTTC CATTGAGTTT GTTTGATATC
CGTACCTTTC GCATCGGTAT CACGGGTAAT TTGTTTACCC GATTTGGCAT TAGCGCTGTG
CCATTTTTGC TGCCGTTGCT TTTGCAGGTG GTGTTCGAGT ACTCTCCCTC GCAAGCTGGC
TGGCTACTTG CCCCTATCGC CGTAGGTGCT ATCGGCATCA AGCCTTGGGT GAGTAAGATT
ATCCAGCGTT ACAGCTATCG CACGGTATTA GTCTATAACA CGACTTTTAT GGGTATCTTG
ATTATCATCT TGGCGCAATT TAATGATGCG GCGCAGTGGA TGTGGTTTAT ACCTATTTTA
ACTATCATGG GCGCATGTAA CTCTATGCAG TTCAGTGCGA TGAACACCAT TACCATTGGC
GACCTGCATG GTACTCAAAC CAGTAGCGGC AATAGCCTGA TGGCTGTCAA CCAACAACTC
GCCATCAGCT TTGGTATTGC CTTTGGCGCT GCGCTGCTCA CTCTGCTACG TGAGCGCCTA
CAAATGGATA CATTGACCGC CTTTCAAACC ACCTATTGGA TATTGGGTGT CTTTACCATT
CTCTCAGGAT TGCATTTTTT ACGCTTAAAA CCTGAGGATG GTCGTGGTTT ATATTAA
|
|---|
| Protein sequence | MVALTPTQDK YLPYVLAVAL FMQILDATIL NTSLPQMAQA LGESPLQMQW AVISYALTLA
IFIPISGFLA DKYGTRRVFL SAIIIFCIGS LLCAASPTLD FLIGSRIVQA IGGAMMTPVA
RLILVKSYPR NKLLTVMNFA VIPALVAPLV GPVLGGYIVQ YTSWHWIFLI NIPMGVFGFI
MGKKLVPALF EDTKRLDWTG FLLFAAAACG FTLAVEFGAQ VGRGFYGLML GLLASLLLGA
YIWHAKRRTA PLFPLSLFDI RTFRIGITGN LFTRFGISAV PFLLPLLLQV VFEYSPSQAG
WLLAPIAVGA IGIKPWVSKI IQRYSYRTVL VYNTTFMGIL IIILAQFNDA AQWMWFIPIL
TIMGACNSMQ FSAMNTITIG DLHGTQTSSG NSLMAVNQQL AISFGIAFGA ALLTLLRERL
QMDTLTAFQT TYWILGVFTI LSGLHFLRLK PEDGRGLY
|
|---|
| |