| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_1362 |
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| Symbol | |
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| ID | 4034333 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter cryohalolentis K5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007969 |
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| Strand | + |
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| Start bp | 1665480 |
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| End bp | 1668662 |
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| Gene Length | 3183 bp |
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| Protein Length | 1060 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637973826 |
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| Product | HsdR family type I site-specific deoxyribonuclease |
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| Protein accession | YP_580625 |
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| Protein GI | 93006188 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG0610] Type I site-specific restriction-modification system, R (restriction) subunit and related helicases |
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| TIGRFAM ID | [TIGR00348] type I site-specific deoxyribonuclease, HsdR family |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.21821 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGAAATTCA CCGAAGACAG GCTTGAACAA GCCATTATCG AGCTACTATC TGCTGAGGGC
TATCCACATA CGCTAGGTGA AGCACTCGAC CGTAATCTTG ACGATGTGCT GATTAAGTCT
GATCTTCGAC AGTTTCTAGC GACCCGTTAT AAAGATGACT TGATTACAGA GTATGAGATT
GATTCTATCA TTCATAAGCT TGAATACCTT CCTGCCTCCG ACCTTTACGA TACCAACAAA
GCCATTATGA AGTTTGTCGC TGATGGGTTT TTCTTGAAGC GTGAGGACTA TACCCAAAAA
GACTTATACA TCCAGCTCAT TGATTATGAA GCACTCGATA ACAATCGCTA CCGCATCGTC
AATCAAATGG AGATACAAGG CTTTGAGTGG CGTATTCCTG ATGGCATTCT TTATATCAAT
GGCCTACCAC TGGTGGTGTT TGAGTTTAAG AGCAGCATCC GCGAAGATGC CACTATGTTT
GATGCCTATA CCCAGCTGAC CACTCGCTAT AAGCGCGATA TTCCAGAGCT GTTTAAATAC
AATGCCCTAT GTATCATTAG CGATGGGGTC AACTCAAAGA TGGGATCGTT CTTTGCGCCT
TATGAGTTCT ACTACTCTTG GCGCAAAGTG ACAGGCGATG AGAAGTTAGA GAAAGACGGT
ATCCATTCCT TACTGACCAT GATGAGCGGC TTATTTGATA AAGCTCGTTT GCTTGATGTT
ATTCGCAATT TTATTTATGT ACCTGATAAA TCAAGCAAGG AAGAAAAAAT CGTTTGTCGT
TATCCGCAGT ATTATGCTGC CACCAAGCTA TACGACAATA TTAAGCAGCA CATGAAGCAG
CTCGATAGTC ATGGCAACTT AATTGACGAT AATGGCTTAC GTGACGGTAA AGGTGGTACG
TACTTTGGCG CCACTGGCTG TGGTAAGAGT TTTACCATGC TGTTTCTAGC ACGTCTGCTG
ATGCGCGACG TTGAGCTTGG CAGTCCAACC ATTATCTTAA TCACTGATCG CACCGATTTA
GACGGTCAGC TGTCTGAAAC CTTTACCAAT GCTAAGACCT ATATCGGCGA TGACAATATC
ATCAGTGTCG AAAGTAGAGC GCATCTGCGC GAACAGTTAA AAGGTCGCAG AAGTGGCGGT
GTGTTCTTGA CCACCATTCA TAAGTTTACC GAAGACTTAG CCCTACTGAC CGAGCGTACC
AACGTCATCT GTATCTCAGA TGAAGCGCAC CGTAGCCAAA TCAATCTACA GCAAAAAATT
ACCGTCACCG AAGACGGTGT CAAAAAGAGC TACGGCTTCG CTAAGTACCT ACATGATTCA
TTACCCAATG CTACTTACGT CGGCTTCACA GGTACACCAA TTGATGCCAC CCTTGATGTC
TTCGGTCCAG TCATTGATAG CTATACCATG GTTGAGTCGG TATTCGATGA AATCACGGTA
CGTATCGTCT ATGAAGGCCG TGCTGCCAAA GTACTACTCG ATAGTAAGCA GCTTGATGAA
GTAGAGAAAT ACTATCAAGA AAGTGCTGAC GCTGGCACCA ATGAGTATCA GATAGAGAAA
AGCAAAAAAG CCATGGCGAG TATGTCCACC ATTCTTGGTG ACCCTGATCG CATAAGAGCC
ATTGCTGAAG ACTTTGTTCA GCATTATGAG GCGCGAGTAG AAGAGGGTAC GACGCAAAAA
GGCAAGGCAA TGTTTGTCTG TAGCAGCCGT GAAGCTGCCT ATCAGCTCTA TAAAGACATC
ATAGCGCTGC GTCCTGAATG GAATGAAGTG CGAGCATGCG AGGAAGGCTC AACCTTGTCA
GAGAGCGACA AGAAAAATGT CATGCCCATG GAGCGCGTCA AGATGATCAT AACTCGTAAC
AAAGATGATG AAAAAGGCAT GTGGGACAAT CTGGGTAACA AAGACTACCG CAAAGAGCTA
GATCGTCAGT TTAAAAATAG CAAGTCTAAC TTTAAGATCG CCATCGTCGT TGATATGTGG
CTCACAGGCT TTGATGTACC GTTTCTAGAT ACCATCTATA TAGATAAACC CCTACAAAAG
CATAGCCTGA TTCAGACCAT CTCACGGGTC AATCGTAAGT TTGAAGGCAA AGAAAGCGGC
TTGGTGGTTG ATTATATCGG CATCAAAAAG CAGATGAATC TGGCGCTCTC GTATTACACA
GGCGGTCAGG TTCAAAACCT AGACGATATT CAAAAGTCAG TCGTGGTGGT CAAAGACCAT
TTGGATCTAC TAGATACCGT CTATCATAAG TTTGACTCTA GTCTTTACTT TAACGGCACG
CCATTAAAGC AGCTCAATTG CTTGAATGCA GCGGCTGACT TTGCGTTGCA ATCTAAGAAG
CTAGAAAAGC GTTTTATGGA TTTGGCCAAG CGTTTGAAGT CTGCTTATGA TATTTGCGTG
GGCAGTGAAG CGCTCACCAA GACTTATAAA GACAAGATTC ATTACTACCT AGCCATTCGT
ACCATCATCT TTAAAATCAC TACTGGCGGC GCACCTGACG TCGAGCAGAT GAACCAAAAG
GTACGTGACC TAGTGAAAGA CGCACTGATG AGTGATGGCG TTGAAGAGAT CTTTAAGCTG
GGTGATAACA CCGACGGTGA GATCGATATC TTCGATGAAG ACTACCTGGC CAAGCTTGAA
GTGATTAAAC AGCCGAATAC CAAGCTAGAG CTACTACAAC AACTACTGGC TAAAGCCATT
GGTGAGCTGA AAAAGACCAA CAAGGTAAAG GGTGTTGATT TCAGTAAGAA AATGAATGCG
CTCGTTGAGA AGTATAACGA CCGTGACGAG CAAGACATAC TACGCGCTGA AGTCATTGGT
GATTTCTCTG ATGAGATCAT CAAGCTATAT AACGAGCTAC GGGTTGAGAT GGCATCGTTT
GGTGAAATGG GTATCGACTT TGAAGAAAAA GCGTTTTACG ACATTCTGCT GTCACTGGCG
CATAAATACG ATTTTACTTA TCCAGAAGAT AAGCTGGTTG AGCTGTCCAA AGAGGTTAAA
AAGCTCATCG ATGATAAAGC TAAGTATATT GACTGGAATA AGCGCGATGA TATCAAAGCG
GAACTACAGT TTGATTTGAT GATATTGCTT GATGAATGGG ATTATCCACC TGTTGATTCA
AAAGAGGTCT ATAAAGAGAT ATTTGAGCAG GCTGAGAACT TTAAGAAGAA TAGAGTGGTT
TAG
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| Protein sequence | MKFTEDRLEQ AIIELLSAEG YPHTLGEALD RNLDDVLIKS DLRQFLATRY KDDLITEYEI
DSIIHKLEYL PASDLYDTNK AIMKFVADGF FLKREDYTQK DLYIQLIDYE ALDNNRYRIV
NQMEIQGFEW RIPDGILYIN GLPLVVFEFK SSIREDATMF DAYTQLTTRY KRDIPELFKY
NALCIISDGV NSKMGSFFAP YEFYYSWRKV TGDEKLEKDG IHSLLTMMSG LFDKARLLDV
IRNFIYVPDK SSKEEKIVCR YPQYYAATKL YDNIKQHMKQ LDSHGNLIDD NGLRDGKGGT
YFGATGCGKS FTMLFLARLL MRDVELGSPT IILITDRTDL DGQLSETFTN AKTYIGDDNI
ISVESRAHLR EQLKGRRSGG VFLTTIHKFT EDLALLTERT NVICISDEAH RSQINLQQKI
TVTEDGVKKS YGFAKYLHDS LPNATYVGFT GTPIDATLDV FGPVIDSYTM VESVFDEITV
RIVYEGRAAK VLLDSKQLDE VEKYYQESAD AGTNEYQIEK SKKAMASMST ILGDPDRIRA
IAEDFVQHYE ARVEEGTTQK GKAMFVCSSR EAAYQLYKDI IALRPEWNEV RACEEGSTLS
ESDKKNVMPM ERVKMIITRN KDDEKGMWDN LGNKDYRKEL DRQFKNSKSN FKIAIVVDMW
LTGFDVPFLD TIYIDKPLQK HSLIQTISRV NRKFEGKESG LVVDYIGIKK QMNLALSYYT
GGQVQNLDDI QKSVVVVKDH LDLLDTVYHK FDSSLYFNGT PLKQLNCLNA AADFALQSKK
LEKRFMDLAK RLKSAYDICV GSEALTKTYK DKIHYYLAIR TIIFKITTGG APDVEQMNQK
VRDLVKDALM SDGVEEIFKL GDNTDGEIDI FDEDYLAKLE VIKQPNTKLE LLQQLLAKAI
GELKKTNKVK GVDFSKKMNA LVEKYNDRDE QDILRAEVIG DFSDEIIKLY NELRVEMASF
GEMGIDFEEK AFYDILLSLA HKYDFTYPED KLVELSKEVK KLIDDKAKYI DWNKRDDIKA
ELQFDLMILL DEWDYPPVDS KEVYKEIFEQ AENFKKNRVV
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