Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_1325 |
Symbol | |
ID | 4034526 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | - |
Start bp | 1622248 |
End bp | 1623132 |
Gene Length | 885 bp |
Protein Length | 294 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637973791 |
Product | LysR family transcriptional regulator |
Protein accession | YP_580590 |
Protein GI | 93006153 |
COG category | [K] Transcription |
COG ID | [COG0583] Transcriptional regulator |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.138863 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAATGGTA TGAACCGGCT AGAGATCAAG CAGCTTAGGG TATTGCAGGC GCTGCTTGAT CTACAAAACC TCTCGCAAGT TGCGCGCAAA ATGGGACTGA CACAACAAGC GATTAGCGAG CAGTTGCGTA AGCTACGGGA TTTGTTTGAT GATCGTTTGT TTATTCGTCA AGGCAATAGC ATGGTGGCAA CACCAAAAGC CTTAGCGATG CGGCAACCGA TCGACGAGAT ATTAAAGCAG TTGGAAGTAT TGTTAGAGCC AGAGGTGTTT ACGCCGCAAA CCTACAAAGG CGTCTTTACG ATTAGTGCAA CCGACTATGC GACGCAGGCA TTATTGCCGC AGTTGTTTAG TATCACACGC CGTGAAGCGC CTAATTTAAA GCTGATAGTG AGAGATTTTG CCTCAGACAA TATCAATCAG CTGATTGCGG CGGGCGAACT TGATTTGTTG ATTACTTTTC CAGAGTTTAT CCCTGATAAT TTATCGTATG TGACGCTATT TGAAGAACAG CATTTATGTG TGACGGGTTA TAAAAACACC TTTGCAACAG AGATATTCAC ACTGGCTCAA GTTGCCGCAC ACCCGCAGCT GGTGGTATCG CCTTCACGTG CCAATTTGCG CGGATCGCAT GATCACTGGT TTGCAGAAAA AGGGCTTAAA CGCCATATTG TGATGTCAGT GCCTAGCTTT TCAGCCGTGC CAGATATCCT ACACACCACC GATATGATTG CCTTTTATCC TGCGCGACTA CTACCAAATA GTAAAGTCAA AGAGATTAAA ATCGAAGCAT TACCGCCTAC CTTTAAGGTA ATCGCAGCAT GGCATCCACG TACCAGTGAC AGTGGTATAC ATCGCTGGTT AATTGAGCAA TTACGAAATT TATAG
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Protein sequence | MNGMNRLEIK QLRVLQALLD LQNLSQVARK MGLTQQAISE QLRKLRDLFD DRLFIRQGNS MVATPKALAM RQPIDEILKQ LEVLLEPEVF TPQTYKGVFT ISATDYATQA LLPQLFSITR REAPNLKLIV RDFASDNINQ LIAAGELDLL ITFPEFIPDN LSYVTLFEEQ HLCVTGYKNT FATEIFTLAQ VAAHPQLVVS PSRANLRGSH DHWFAEKGLK RHIVMSVPSF SAVPDILHTT DMIAFYPARL LPNSKVKEIK IEALPPTFKV IAAWHPRTSD SGIHRWLIEQ LRNL
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