| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_1310 |
|---|
| Symbol | |
|---|
| ID | 4035440 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter cryohalolentis K5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007969 |
|---|
| Strand | - |
|---|
| Start bp | 1600112 |
|---|
| End bp | 1601239 |
|---|
| Gene Length | 1128 bp |
|---|
| Protein Length | 375 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 47% |
|---|
| IMG OID | 637973776 |
|---|
| Product | methylcitrate synthase |
|---|
| Protein accession | YP_580575 |
|---|
| Protein GI | 93006138 |
|---|
| COG category | [C] Energy production and conversion |
|---|
| COG ID | [COG0372] Citrate synthase |
|---|
| TIGRFAM ID | [TIGR01800] 2-methylcitrate synthase/citrate synthase II |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCAGCAC AAAAAGAACT TTCGGGCGCA GGTTTACGTG GTCAAGTAGC AGGTAAGACC
GCTTTGTCTA CCGTTGGCAA ATCAGGCTCA GGTCTGACTT ATCGCGGTTA TGACGTATCA
GAGCTGGCTG ACAAGTGCAT CTTTGAGGAA GTGGCTTATA TGTTGCTATA CGGCAACTTA
CCTACCCAAA GTGAGCTTGA TGCTTATCAA ACTAAATTGA AAGGTTTACG TGGCTTACCA
CAAGCATTAA AAGATGTGCT TGAGCGTATT CCTGCGGACG CCCATCCGAT GGACGTATTA
CGTACCGGTT GCTCGATGCT TGGTAACCTT GAGATGGAAA CTGACTTCTC ACAAGAGAAC
GATAAAACCG ACCGTATGCT GGCGGTTTTC CCATCAATCA TCAATTACTG GTATCGCTTT
ACCCACGACA ACGTGCGTAT CGAAACTGAA ACTGATGACG ATACCATTGG CGGTCATTTC
TTACATCTGC TAAAAGGTGA AAAACCAAAC GAGCTACATA CTAAGGTAAT GAACGTATCA
CTGATTCTTT ATGCTGAGCA TGAGTTTAAC GCCTCAACCT TTACCGCTCG CGTCTGTGCG
TCTACCCTGT CTGACATTCA TTCTTGTATC ACTGGCGCGA TTGGCTCATT ACGCGGTCAT
TTACATGGCG GCGCCAATGA AGCGGCGATG GATATGATTG AAGGATTCAC CTCTCCTGAT
CAAGCAGAGT CTGAGATGAT GGCAATGCTG GCGCGTAAAG ATAAGATTAT GGGCTTTGGT
CATGCTATCT ATAGCGAATC AGATCCACGT AATGTTGTAA TTAAAGGTTG GGCTGAAAAA
CTGGCAGCAG ATGTTGGTGA TGAAGTGCTA TACCCAGTAT CAGTACGCTG TGAAGAAGTG
ATGTGGCGCG AGAAAAAACT CTTCTGTAAT GCTGACTTTT TCCATGCGTC TGCCTATCAC
TTTATGGGCA TTCCAACCAA ACTGTTTACG CCAATCTTTG TTTGCTCGCG TCTAACAGGC
TGGGCAGCAC ACGTGTTTGA GCAACGTGCG AACAACCGTA TCATTCGCCC AAGTGCGGAA
TATACTGGCG AAGAGCTGCG CCCAGTACCA GAGATGAGCG CGCGTTAA
|
|---|
| Protein sequence | MAAQKELSGA GLRGQVAGKT ALSTVGKSGS GLTYRGYDVS ELADKCIFEE VAYMLLYGNL
PTQSELDAYQ TKLKGLRGLP QALKDVLERI PADAHPMDVL RTGCSMLGNL EMETDFSQEN
DKTDRMLAVF PSIINYWYRF THDNVRIETE TDDDTIGGHF LHLLKGEKPN ELHTKVMNVS
LILYAEHEFN ASTFTARVCA STLSDIHSCI TGAIGSLRGH LHGGANEAAM DMIEGFTSPD
QAESEMMAML ARKDKIMGFG HAIYSESDPR NVVIKGWAEK LAADVGDEVL YPVSVRCEEV
MWREKKLFCN ADFFHASAYH FMGIPTKLFT PIFVCSRLTG WAAHVFEQRA NNRIIRPSAE
YTGEELRPVP EMSAR
|
|---|
| |