Gene Pcryo_1309 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_1309 
Symbol 
ID4035439 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp1597229 
End bp1599886 
Gene Length2658 bp 
Protein Length885 aa 
Translation table11 
GC content47% 
IMG OID637973775 
Productaconitate hydratase 
Protein accessionYP_580574 
Protein GI93006137 
COG category[C] Energy production and conversion 
COG ID[COG1048] Aconitase A 
TIGRFAM ID[TIGR01341] aconitate hydratase 1
[TIGR02333] 2-methylisocitrate dehydratase, Fe/S-dependent 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGACAACG CCCTTGTACA ACCGATGAAT GAACCCTTTA AAAAGCCATT ACCTGGCACA 
GATTTATATT ACTTTGATAC CCGTGAAGCC ATCGAAAATA TCGAAGCTGG CGCGTATGAC
AAGCTACCGT TCTGCTCAAA AGTATTGTGT GAAAACTTGG TACGCCGCTG CCCACCAGAA
GATTTAACCG CAGCGCTCAA GCAACATATC GAAGGCAAGC AAGATTTAGA TTTTCCGTGG
TACCCTGCCC GCGTCGTTTG TCATGACATC CTAGGTCAGA CCGCGTTTGT TGATTTGGCC
GGTTTACGTG ACGCCATCGC TGAGCAAGGC GGTGACCCAT CAAAAGTGAA TCCAATCGTT
CCAACACAAT TGATTGTTGA CCATTCATTG GCTGTTGAGC ATGCAGGCTT TGAAGAAAAT
GCATTTGAGA AAAACCGTGC TATCGAAGAG CGCCGTAACG ATGACCGTTT TCACTTTATC
AACTGGTGTC AGTATGCCTT TGATAACGTC AACGTCGTAC CGCCCGGTAA CGGCATCATG
CACCAAATCA ACTTAGAAAA AATGTCGCCG GTTGTGCAAG TGGTACAAAA TAAAGCCGGT
GAACAAGTGG CATTTGCCGA TACTTTGGTT GGTACTGATA GCCATACCCC GATGGTTGAT
GCTTTAGGCG TTATCTCAAT TGGTGTTGGC GGGCTTGAAG CGGAAAGCGT CATGCTTGGT
AACCCGTCTT ATATGCGTCT CCCTGATTAC GTTGGCGTCA AGCTAACTGG TAAATTGCAA
AGAGGCATTA CTGGTACCGA TTTGGTACTC GCTATGACTG AATTCTTACG TGATGCAGGC
GTGGTATCTA CTTATATTGA ATTCTTCGGT GAAGGTGCGC GCCAACTGAG CGTTGGTGAC
CGTGCATCTA TCTCAAACAT GACCCCAGAA TATGGTGCAA CCGCGGCGAT GTTCTATATT
GATGAGCAAA CCATCGATTA TTTACGATTA ACCGGTCGTA GTGAAGCGCA AATCAAATTG
GTCGAGCAAT ATGCCAAGCA AACCGGTTTA TGGGCTGATG GTATGGAAAA AGCCGAATAC
GCGCGTGTGC TTGAGTTTGA TTTGTCCGCT GTTGTCCGTA ATATGGCAGG CCCTTCACGT
CCGCATGCGC GTGTTTCAAC CACAGACTTG GTTGCGAAAG GAATTGCTCA CGGTGAGGGT
GATAAATTAC CAGAGCCAAA AGATGGTCTA ATGCCAGATG GCGCGGTGAT TATCGCCGCG
ATTACCAGCT GTACCAATAC GTCTAATCCT CGCAACATGG TTGCTGCTGG TCTTGTCGCC
CGTAATGCTA ATAAGAAGGG CTTATTGCGT AAGCCTTGGG TAAAATCGTC ATTAGCACCC
GGTTCAAAAA CCGTAAAAAT GTACCTAGAA GAAGCGGGTC TGATGCCTGA GCTACAAGAA
ATCGGCTTTG ACGTGGTTGG CTTTGCTTGT ACCACTTGTA ATGGTATGAG TGGCGCGCTT
GATCCTGATA TCGAAAAAGA AATCATCGAT AACGATCTGT TCACCACTGC GGTATTATCG
GGTAACCGTA ACTTTGATGG TCGTATCCAC CCATATGCCA AGCAAGCGTT CTTAGCATCA
CCGCCACTGG TCATCGCTTA TGCTATCGCC GGTAACATTC GCTTTGATAT TGAAAAAGAC
TCATTGGGTA AAGACCAACA TGGCAATGAC GTTTATCTAA AAGACATCTG GTTTGATGAT
GACGAAGTCG ATGCTATTGT CGCTGCTGCC GTGAAGCCTG AGCAGTTCAA TGCCGTGTAT
ATCCCGATGT TTGATGAAGC CAAAAAAGAT ACGGGTAAAG CGCTCAGTCC ACTATATAAC
TGGCGTGATC AGACCACTTA TATTCGTCGT CCACCCTATT GGGAAGGCAA AATGGCAGCG
ATGAATAAGC TAAAAGGTAT GCGTCCATTA GCGGTATTAG GTGACAATAT TACCACTGAC
CATTTATCAC CGTCTAATGC GATTTTGGGC GACTCAGCAG CTGGCGAGTA CCTTGATACC
ATGGGTCTGC CAAGCGAGGA CTATAACTCT TATGCGACCC ATCGCGGTGA CCATCTAACT
GCGCAGCGTG CGACATTTGC TAACCCTAAG CTGTTGAATG AAATGGTACG TGATGAAAAA
GGTGAAGTAA TACAAGGTTC GCTTGCTAGG GTTGAGCCAC AAGGTCAAGT TATGCGTATG
TGGGAAGCAA TCGAAACCTA TATGAACCGT GAGCAGCCGC TGATCATTAT CGCAGGTGAC
GGCTATGGTC AAGGCTCAAG CCGTGACTGG GCTGCCAAAG GTGTACGTTT AGCAGGCGTT
GAGGTGGTGG TCGCTGAAGA TTTTGAACGT ATTCATCGTC AAAACTTGGT TGGTATGGGC
GCACTACCTT TGCAGTTTGA AAAAGGTACG ACTCGGAACA CCCTAAATAT AGATGGTACG
GAAGTCTTTG ATGTCACAGG CGAAGTTTCT GCTGGCGGCA TGATGACGCT GGTGATTAAC
CGTGCTGATG GTAGCACGAC TGAAACCCCT ATCATTTGCC GTTTAGATAC CGCTGATGAG
GTTAAAATGT ATAACGCAGG CGGGATGCTA CAGCGCTTTG CCAAAGAGTT TATCGATGGC
ACGTTAGATA TCGCGTAA
 
Protein sequence
MDNALVQPMN EPFKKPLPGT DLYYFDTREA IENIEAGAYD KLPFCSKVLC ENLVRRCPPE 
DLTAALKQHI EGKQDLDFPW YPARVVCHDI LGQTAFVDLA GLRDAIAEQG GDPSKVNPIV
PTQLIVDHSL AVEHAGFEEN AFEKNRAIEE RRNDDRFHFI NWCQYAFDNV NVVPPGNGIM
HQINLEKMSP VVQVVQNKAG EQVAFADTLV GTDSHTPMVD ALGVISIGVG GLEAESVMLG
NPSYMRLPDY VGVKLTGKLQ RGITGTDLVL AMTEFLRDAG VVSTYIEFFG EGARQLSVGD
RASISNMTPE YGATAAMFYI DEQTIDYLRL TGRSEAQIKL VEQYAKQTGL WADGMEKAEY
ARVLEFDLSA VVRNMAGPSR PHARVSTTDL VAKGIAHGEG DKLPEPKDGL MPDGAVIIAA
ITSCTNTSNP RNMVAAGLVA RNANKKGLLR KPWVKSSLAP GSKTVKMYLE EAGLMPELQE
IGFDVVGFAC TTCNGMSGAL DPDIEKEIID NDLFTTAVLS GNRNFDGRIH PYAKQAFLAS
PPLVIAYAIA GNIRFDIEKD SLGKDQHGND VYLKDIWFDD DEVDAIVAAA VKPEQFNAVY
IPMFDEAKKD TGKALSPLYN WRDQTTYIRR PPYWEGKMAA MNKLKGMRPL AVLGDNITTD
HLSPSNAILG DSAAGEYLDT MGLPSEDYNS YATHRGDHLT AQRATFANPK LLNEMVRDEK
GEVIQGSLAR VEPQGQVMRM WEAIETYMNR EQPLIIIAGD GYGQGSSRDW AAKGVRLAGV
EVVVAEDFER IHRQNLVGMG ALPLQFEKGT TRNTLNIDGT EVFDVTGEVS AGGMMTLVIN
RADGSTTETP IICRLDTADE VKMYNAGGML QRFAKEFIDG TLDIA