| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_1301 |
|---|
| Symbol | |
|---|
| ID | 4034501 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter cryohalolentis K5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007969 |
|---|
| Strand | + |
|---|
| Start bp | 1589211 |
|---|
| End bp | 1590002 |
|---|
| Gene Length | 792 bp |
|---|
| Protein Length | 263 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637973767 |
|---|
| Product | C factor cell-cell signaling protein |
|---|
| Protein accession | YP_580566 |
|---|
| Protein GI | 93006129 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only |
|---|
| COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 16 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAATACTA AAAATTATTT TATCATTGGT GGTACAGGCG GTATCGGTAA AGCCATGGTT
GAACAATTGG TCCACACTGC CGCCAATGAA CACGCCAGCA CCCTTACGAA TAATGATATG
CACACCAATA CTGACATCCG TGTCTTTGCC ACATACCATA AAAGCGTGCC TGATTTTGAA
GCAGAAAATC TGTATTGGAT AGCGATGGAT ATCTGTGACG AGCAAAGTAT CAAACAAGCA
GCTGATGCGA TTAAGCAGCA AACCACACAT ATAGATTGGG TGATTAATTG TGCTGGACTA
CTGCATACCA AGACGCGTCA GCCAGAAAAA TCACTACAAC AGATTGAAAG TGAGTTTTTT
TTACAGAATA TGCAGGTTAA TGCTTTGGCA AGCTTGCTCA TTGCCAAGCA CATCAAGCCG
CTATTGGCGA AAGCTGAACG AAGCGCAGAC AAACCGGCGA TTTTTGCGAC GATATCGGCA
AGGGTAGGTA GTATCAGTGA CAATCAACTT GGCGGTTGGT ACAGCTACCG CATGAGTAAG
GCGGCGCTTA ATATGGGTAT GAAAAACCTG AGTATTGAAT GGAGTCGATC GCTTAAAAAC
GTCTGCGTGG TAGTGATGCA GCCCGGCACT GTCAACACCC AGCTATCAGC TCCGTTTCAG
GGCAACGTAG CTGACGGGCA GTTATTTTCG CCAGCCTATA GTGCTGAATG CTTGCTTGAG
GTACTCAGTA AGATGGGTGC TGCCCAATCA GGGAGTTTTG TGGATTGGGC AGGGGAATCT
ATACCGTGGT AA
|
|---|
| Protein sequence | MNTKNYFIIG GTGGIGKAMV EQLVHTAANE HASTLTNNDM HTNTDIRVFA TYHKSVPDFE
AENLYWIAMD ICDEQSIKQA ADAIKQQTTH IDWVINCAGL LHTKTRQPEK SLQQIESEFF
LQNMQVNALA SLLIAKHIKP LLAKAERSAD KPAIFATISA RVGSISDNQL GGWYSYRMSK
AALNMGMKNL SIEWSRSLKN VCVVVMQPGT VNTQLSAPFQ GNVADGQLFS PAYSAECLLE
VLSKMGAAQS GSFVDWAGES IPW
|
|---|
| |