Gene Pcryo_1253 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_1253 
Symbol 
ID4034282 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp1523164 
End bp1524075 
Gene Length912 bp 
Protein Length303 aa 
Translation table11 
GC content48% 
IMG OID637973718 
Producthaloalkane dehalogenase 
Protein accessionYP_580518 
Protein GI93006081 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0763231 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.65305 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAATAC TCAGAACTCC CGATTCGCGT TTTGCAAACC TACCAGATTA CAACTTTGAC 
CCGCACTATC TAATGGTCGA CGACAGCGAA GACAGTGAGC TGCGCGTGCA TTATTTAGAC
GAAGGACCAA GAGACGCTGA TCCAGTGTTA CTGCTGCATG GGGAGCCTTC ATGGTGTTAT
CTATATCGTA AAATGATTCC GATACTGACT GCAGCGGGAC ACCGCGTTAT TGCGCCAGAC
CTCCCCGGTT TTGGGCGCTC AGACAAACCC GCGTCTCGTA CTGACTATAC TTACCAACGT
CATGTCAACT GGATGCAATC CGTACTCGAC CAATTAGATC TGAATAACAT CACTCTGTTT
TGTCAAGATT GGGGTGGACT GATTGGTTTG CGTTTGGTTG CAGAAAATCC AGACCGATTT
GCTCGGGTAG CAGCTGGCAA CACCATGCTC CCCACCGGCG ACCACGATCT AGGTGAAGGT
TTTCGTAAAT GGCAACAATT CTCGCAGGAA ATACCTCAAT TTCATGTCGG AGGGACCATC
AAGAGCGGTA CCGTTACCAA GCTATCACAG GCGGTGATTG ACGCCTACAA TGCGCCATTT
CCTGATGAAT CCTATAAGGA GGGTGCTAGA CAGTTTCCAC TGCTTGTACC CTCGACGCCG
GATGATCCTG CTTCAGAAAA TAATCGCGCC GCATGGATTG AGCTGAGTAA ATGGACAAAG
CCCTTTATCA CACTATTCAG CGATTCTGAC CCAGTGACTG CTGGTGGCGA TCGCATTATG
CAAAAAATCA TTCCCGGAAC CAAAGGTCAA GCACATACGA CTATTGCCAA CGGCGGACAT
TTTCTTCAAG AAGACCAAGG TGAAAAAGTG GCTAAGCTTT TGGTCCAATT TATTCATGAT
AACCCGAGAT AA
 
Protein sequence
MKILRTPDSR FANLPDYNFD PHYLMVDDSE DSELRVHYLD EGPRDADPVL LLHGEPSWCY 
LYRKMIPILT AAGHRVIAPD LPGFGRSDKP ASRTDYTYQR HVNWMQSVLD QLDLNNITLF
CQDWGGLIGL RLVAENPDRF ARVAAGNTML PTGDHDLGEG FRKWQQFSQE IPQFHVGGTI
KSGTVTKLSQ AVIDAYNAPF PDESYKEGAR QFPLLVPSTP DDPASENNRA AWIELSKWTK
PFITLFSDSD PVTAGGDRIM QKIIPGTKGQ AHTTIANGGH FLQEDQGEKV AKLLVQFIHD
NPR