Gene Pcryo_1248 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_1248 
Symbol 
ID4034277 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp1520316 
End bp1520957 
Gene Length642 bp 
Protein Length213 aa 
Translation table11 
GC content46% 
IMG OID637973713 
ProductMotA/TolQ/ExbB proton channel 
Protein accessionYP_580513 
Protein GI93006076 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0811] Biopolymer transport proteins 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.371589 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGATTTTA CAGATTATTG GCAATATACG GATATCATTA CTAAGAGTTT ATTTTTCGCA 
TTATTTGCTT TGTCGATTGT GTCTTGGGTG ACAGGGATTT TACGATTGTA CTATAGCCAT
CAGTTGGCTA AAACCGTCGT CGTTGACTTA GCTCAGCAAA TACACAATCA GATACCGCCC
ACTTTGCAAG CTAGTCCAGA AGAGCGCAGG CTTCTCACCG AACAGATGCT ATTACAGCAG
ATTGGTCGAT ATCGTTATCA AAGCGAGCAA GGGTTACCAC TGCTCGGTAC GACTGCTGCT
ATTGCACCCT TTATTGGGCT ATTTGGGACA GTGTGGGGCA TATTCCATGC GCTACGTAGT
ATTGGTGATA GTGGGCAGGC AGGACTTGCC CAAGTAGCGG GCCCAGTAGG TGAAGCGCTT
ATTATGACTG GTCTAGGTCT TGCGGTCGCG ATTCCTGCGG TGATTTTCTA TAACGTCATT
ACGCGTATGA ATCGCCGGAT CTTGTATAGA GCCAATGACA TTGCGCATGG TCTATTAGGC
GAGTCAATGC GACCGAGTAT GCTAGCAAAT AGCAAAGCAA CTCTCGTTGA AGCAACTGGT
GCCAAAGTGA CTGATAGTCA AGTTGCTGAT GGCAAAGTAT AG
 
Protein sequence
MDFTDYWQYT DIITKSLFFA LFALSIVSWV TGILRLYYSH QLAKTVVVDL AQQIHNQIPP 
TLQASPEERR LLTEQMLLQQ IGRYRYQSEQ GLPLLGTTAA IAPFIGLFGT VWGIFHALRS
IGDSGQAGLA QVAGPVGEAL IMTGLGLAVA IPAVIFYNVI TRMNRRILYR ANDIAHGLLG
ESMRPSMLAN SKATLVEATG AKVTDSQVAD GKV