| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_1237 |
|---|
| Symbol | |
|---|
| ID | 4035787 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter cryohalolentis K5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007969 |
|---|
| Strand | + |
|---|
| Start bp | 1507153 |
|---|
| End bp | 1508847 |
|---|
| Gene Length | 1695 bp |
|---|
| Protein Length | 564 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637973702 |
|---|
| Product | AMP-dependent synthetase and ligase |
|---|
| Protein accession | YP_580502 |
|---|
| Protein GI | 93006065 |
|---|
| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
|---|
| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.48061 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACTACGA TACTTAACCA ACATGAGGAT TACCAGCAAG CTCAAGAAGC CTATGGTTTT
CCTTTGATTA TCAAACAGCT ACTAAACCGT GCAAAAATCG CCTCTAAAGA TCAAACCATT
AGTTATGCGG ATAAGGTTAC TTATACGTAT TCTGAATTTT TTAAGCGTGT TAATCGCTTG
GCAAACGTAC TTAAAAACAT GGGTTTGCAA GCAGGTGATG TGGTTGCTGT TATGGATTGG
GACAGTCATC GTTACCTTGA AGCGTACTTT GCTGTGCCTA TGTCTGGAAT GATTTTGCAA
ACGGTCAATG TACGCTTGGC TGAAGATAAA GTGCTGTATA CCATCAATCA TTCTAAACCA
AAAGCTTTGT TACTTAATGC TGAGTTTGAG CCAATGGCTA AAAACTACCG TCATGAAGCC
CCTTCTATTG AGAAAATTAT TTGGTTGGAT GATGCTGAGT ATGATGAAGA CACTATAAAA
GCTCAGCAAA CTAGCATGCC AGATTATGTT GAAGGTGAGT ATGAGGCAAT GCTAGCCGCT
GCCAGTGATG AGTTTGATTT TCCCGATTTT GATGAAAATA CCATTGCTAC CACATTTTAT
ACCAGTGGTA CGACGGGTGA CCCAAAAGGG GTTTTCTTTA CCCATCGACA GATCGTATTA
CAGACGCTAT CGAGTACGCT TGCCTCTGCA CTCAGCGCCG AAGGTCAAGG TGCTCGCTAT
AATGATGTTT ATATGCCAAT GACGCCATTG TTCCATGTGC ATGCTTGGTG CTGGCCGTAT
GGGGCAACCA TGATAGGGCT AAAACAAGTG TATCCAGGGC GCTATGTATC CGAAGTATTG
GTTGACTTGA TTGAACAGCA TAAGGTAACG CTATCACATG GTGTCCCAAC CATTTTACAA
ATGTTAATCA AAGAAATGGC AACCCGAGGA CGCAAGTTTA ACGGTCTTAA ATTGTCAGTA
GGGGGCTCCA AATTAAACGA AGCTCTAGCT GAAGCCGCTA TTGAAAGTGG CATAGAGTTC
ATCTCGGGGT TTGGAATGTC AGAGTCCTGT CCTGTCCTTG CCAGAATGGC ATTTGGTGAT
CAGACAAGTA CTATGACAAC GACAGAGCAG ATCAACTATC GTTGTCTTTC TGGCTCACCA
ATTATGCTGG TATCGATGGA GCTTTGGGAT GCGAACGGCA AATCTTTACC GATGGATGGT
GAGTCGACCG GCGAACTCGT CGTTCGAGCG CCTTGGCTGA CCCAAAGCTA TTTTAAGAAT
CCAGATGCTG GCGATGAGTT ATGGCGTGGT GGCTGGATGC ATACCCAAGA TATTGCCTGC
ATTACCGCTG ATGGTACTCT AAAAATTACG GATAGACTCA AAGATGTCAT CAAGTCAGGT
GGCGAGTGGG TATCCTCGCT TGAAGTCGAA AATATTTTAT CATTCCATCC TTGCGTTGCT
GAAGTGGCCG TTATTGGAGT AGCGGATGAA AAATGGGGCG AACGTCCTCT AGCGTTAGTG
GTCCTGAAAC CTGATCATAC CGATATTAAA GCGGAGGAAA TTTTAGCATT GGGTCATCAA
GCGGTTGAAA AAGGCTATTT ACCAAAGTAT GGCGTCCCAA GTGAAATAAA GTTCTTAAGA
GAAATGCCGA AGACCAGTGT GGGTAAGCTT GATAAGAAAA AGATGCGGAT GATGTACGCA
GAAAAATTAA TCTAA
|
|---|
| Protein sequence | MTTILNQHED YQQAQEAYGF PLIIKQLLNR AKIASKDQTI SYADKVTYTY SEFFKRVNRL
ANVLKNMGLQ AGDVVAVMDW DSHRYLEAYF AVPMSGMILQ TVNVRLAEDK VLYTINHSKP
KALLLNAEFE PMAKNYRHEA PSIEKIIWLD DAEYDEDTIK AQQTSMPDYV EGEYEAMLAA
ASDEFDFPDF DENTIATTFY TSGTTGDPKG VFFTHRQIVL QTLSSTLASA LSAEGQGARY
NDVYMPMTPL FHVHAWCWPY GATMIGLKQV YPGRYVSEVL VDLIEQHKVT LSHGVPTILQ
MLIKEMATRG RKFNGLKLSV GGSKLNEALA EAAIESGIEF ISGFGMSESC PVLARMAFGD
QTSTMTTTEQ INYRCLSGSP IMLVSMELWD ANGKSLPMDG ESTGELVVRA PWLTQSYFKN
PDAGDELWRG GWMHTQDIAC ITADGTLKIT DRLKDVIKSG GEWVSSLEVE NILSFHPCVA
EVAVIGVADE KWGERPLALV VLKPDHTDIK AEEILALGHQ AVEKGYLPKY GVPSEIKFLR
EMPKTSVGKL DKKKMRMMYA EKLI
|
|---|
| |