Gene Pcryo_1236 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_1236 
Symbol 
ID4035786 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp1505901 
End bp1507103 
Gene Length1203 bp 
Protein Length400 aa 
Translation table11 
GC content46% 
IMG OID637973701 
Productacetyl-CoA acetyltransferase 
Protein accessionYP_580501 
Protein GI93006064 
COG category[I] Lipid transport and metabolism 
COG ID[COG0183] Acetyl-CoA acetyltransferase 
TIGRFAM ID[TIGR01930] acetyl-CoA acetyltransferases
[TIGR02430] beta-ketoadipyl CoA thiolase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.439957 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAGATG CCTATATTTA TGACGGATTA AGAAGCCCTT TTGGTCGCCA TGGAGGCGCA 
TTAGCCACCG TTCGTCCTGA TGACATGATT GCGACAGTAA TGAAAGCTTT GGTTGAAAAG
CATCAATTAC CTAATGATAT CTTTAATGAA GTGCTGATCG GTAATACCAA TCAAGCTGGT
GAGGACTCAC GCAATATCGC CCGCAATGCT GCGTTATTGG CAGGATTAGA TGTCAAAACA
CCCGGTCAAA CCGTCAATCG CTTATGCGCT TCAGGACTAT CGACCATTAT CGATGCCGCT
CGTAGTATTA CTTGTCATGA AGGGGATATA TTTTTAGCAG GGGGCGTTGA GTCCATGACC
CGCGCACCTT TTGTCTTTGC TAAGACTGAG CAGCCTTTTA GTCGTGAATT TAAAGTATTT
GATACGACTA TTGGCAGCCG GTTCCCCAAT CCTATCATCG AAAAACAGTT TGGCAGCGAT
AGCATGCCGC AAACGGGTGA TAATGTCGCC CTCAAATACG GTATCACTCG CGAAGAAGCG
GATAAATTTG CAGCGGCCTC GCAAGCCAAA TACCAAGCGG CAAAACAAGC TGGGTTCTTC
AACGATGAAA TAACACCAAT TATGGTATCG CAAGGTAAAA AGTTACCCGA AAAAGCAATA
GTAGAAGATG AGCATCCTCG TGCCAGCTCT ACTGTTGAGG CACTACAAAA GCTAAAACCT
TTAAATAATG AAGGTATCGT CACAGCAGGC AATGCGTCAG GTATCAATGA TGGTGCAGCT
GCGTTGATTA TTGGGTCAAA GCGAGCAGAG GAAACGTTAG GCTTTAAGCC TATCGCTAAG
ATTCTTTCGT CCGGTGCTAT GGGTGTTGAG CCTAATATTA TGGGCGTAGG CCCTGTTGAG
GCGATTAAAC TGGCATTGAA ACGTGCAAAT TTGACCCTTG ATGATATGTC CATTATTGAG
ATTAATGAAG CGTTTGCCTC GCAAGTACTC GGCTGCTTGA AAGGTTTAGA TATTGACTTT
GATGACAAAC GCGTCAACCC TAACGGCGGA GCAATTGCCG TCGGTCATCC GCTGGGTGCA
TCAGGCGCAA GACTTGCGTT AAGTACGGCG CGTGAGCTAC AGCGTACGGG CGAAAAATAC
GCGGTGGTCA GTTTATGCAT TGGCATTGGG CAAGGGCTTG CCATGGTGAT TGAACGAGTC
TAA
 
Protein sequence
MLDAYIYDGL RSPFGRHGGA LATVRPDDMI ATVMKALVEK HQLPNDIFNE VLIGNTNQAG 
EDSRNIARNA ALLAGLDVKT PGQTVNRLCA SGLSTIIDAA RSITCHEGDI FLAGGVESMT
RAPFVFAKTE QPFSREFKVF DTTIGSRFPN PIIEKQFGSD SMPQTGDNVA LKYGITREEA
DKFAAASQAK YQAAKQAGFF NDEITPIMVS QGKKLPEKAI VEDEHPRASS TVEALQKLKP
LNNEGIVTAG NASGINDGAA ALIIGSKRAE ETLGFKPIAK ILSSGAMGVE PNIMGVGPVE
AIKLALKRAN LTLDDMSIIE INEAFASQVL GCLKGLDIDF DDKRVNPNGG AIAVGHPLGA
SGARLALSTA RELQRTGEKY AVVSLCIGIG QGLAMVIERV