| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_1220 |
|---|
| Symbol | |
|---|
| ID | 4035052 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter cryohalolentis K5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007969 |
|---|
| Strand | + |
|---|
| Start bp | 1479103 |
|---|
| End bp | 1479906 |
|---|
| Gene Length | 804 bp |
|---|
| Protein Length | 267 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 637973685 |
|---|
| Product | AraC family transcriptional regulator |
|---|
| Protein accession | YP_580485 |
|---|
| Protein GI | 93006048 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG2207] AraC-type DNA-binding domain-containing proteins |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.21436 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATGGATG TAATAGAAGA GACGGGGCTT GTCGGTTTTA CTGCCTCGTT GCGGCAGAGC
ATGGCTACTT ATTATTCAGA AAGTAGTGAG GCATTTATTG GTAATGTCTC ATTATTACTG
CCTCTACTTG ATACTTTAAA GAATGTGGTG TTTTTTGTGA AAGATGAGCA GGCGCGCTAC
CAGCTGGCAA ACAAAACATT GTTAAAGCGT TGTAAGTTAA GTCAGCATAG TGACATCGTA
GGTTTTACCA CTGAGCAGGT GTTTTCTCAT CAGCAGAGTA AGGATTATAT CTTGCAGGAT
ATGAAAGTGT TGCGAGATGG GAAGTCAATC GTTGATAATT TAGAGCTACA CAGTTATGCA
TCTGGTCAGT TAGGCTGGTG TATTACCAAT AAACTGCCTA TCTATAATGA CAATCAACAA
GTGGTCGCGA TGGTTGGGAT ATCCGTCGAT ATTGATGAGG ATAACGAACG CATTTTACGT
AAACACGCGA GACTGGCTGA CGTAGCACAG TTCGTACGCG GTAATCTGGA TCAGAAAATC
AATATAGCAG AACTGGCGGA GCTGTCACAT TTTAGCTTAT CGCAGTTAGA GCGCACCTTT
AAAGCAGTGC TAAATATGTC GCCTTTACAG TTTGTACAAA AGCTGAGATT AGAATATGCG
GTTAAGCTAT TAGCCATGCC TGAGATGTCA GTCACTCAAA TATCGTTGAA CTGCGGCTAT
AGCGATCATA GTGCCTTTAG CCGCCAGTTC AAACAGTTTA CGGGCTTGTC ACCCAGCCAA
TTTCGCCAAA CGCATTTATC ATGA
|
|---|
| Protein sequence | MMDVIEETGL VGFTASLRQS MATYYSESSE AFIGNVSLLL PLLDTLKNVV FFVKDEQARY
QLANKTLLKR CKLSQHSDIV GFTTEQVFSH QQSKDYILQD MKVLRDGKSI VDNLELHSYA
SGQLGWCITN KLPIYNDNQQ VVAMVGISVD IDEDNERILR KHARLADVAQ FVRGNLDQKI
NIAELAELSH FSLSQLERTF KAVLNMSPLQ FVQKLRLEYA VKLLAMPEMS VTQISLNCGY
SDHSAFSRQF KQFTGLSPSQ FRQTHLS
|
|---|
| |