Gene Pcryo_1218 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_1218 
Symbol 
ID4035050 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp1476430 
End bp1477677 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content47% 
IMG OID637973683 
ProductFAD dependent oxidoreductase 
Protein accessionYP_580483 
Protein GI93006046 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0665] Glycine/D-amino acid oxidases (deaminating) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACGATCT CAAACTTCGA CTTACATATT ATTGGCGGCG GTATTATCGG CCTAGCAACG 
GCAGTGACGT TGCAAGCACG AGGCGTCAAG GTCGCACTGC TAGACGCCAA TGAAGTGGGT
CAAGGCGCAT CATTAGGTAA CGCTGGTCAT ATCGCTACCG AGCAAGTATT CCCCATTGCT
GATGCGAGCA TGCTCCGTCA TGTACCCGCC ATGCTATTGA ATCCGACTGG ACCGCTACGC
ATAGACTGGC GCTATCTGCC GCGTTTGATG CCTTGGGCAA TGCAGTTGCT AATGAATATG
CGCCCTGAGC CATTTGAGCG GATTCATCAA GCGTTGTTAA GCTTAAATAA AAATAGCCTG
CAAGCCTGGC AAGGTTTTGC CAATCAATGG CAATTGGAAG AATGGGTGCA AGTAAAAGGT
TCATTATTGA CGGTCGAAAA GACAAGTAGC GTCGATTTTC TCATAACACA TGGCAGTCGA
CTTAACGATA TTGGTGTGGC TAATGAGCTA TTGACCAGAG AAGCGCTATT AGAGCGTGAA
CCTGCTTTAC AAGATAACCA GTTAGCGGCG TTATTTTTCC CAAATACAGG ACATATCACC
AATTTAAAAG CCGTCATTAA TCAGCTTCAC CATATCTTTA GACAATTAGG CGGTCATGTC
ATTGAACATT GCCATGTCCT TGCAGCGACC AATGATACAG ATGGCATTCA TCTAACAACC
AGTCAAGGTG ATATGACAGC GTCTAAAGTG ATGCTAGCAG CAGGCGCCCA CTCTAAGGCA
TTGGCCAAGC AGCTAACAGG CGTGAATGTA CCGCTAGATA CCGAACGCGG TTATCACTTA
ATGCTACCGC ATGAAAGTAC GCGCTTACAG ATACCGGTAT CAAGCATGGA TCGCCGTTTT
ATTATGACAC CGATGCAAGA CGGCCTACGT TTGGCGGGTA CGGTGGAGTA CGCAGGACTG
GACGCGCCTG CCAATATGCA GCGTGCACAT ATGCTATTAC AACAAGCGCA GCCTATATTA
AAAGCGCCGT TAGATGCTAG CGATAGCGTG TCATGGATGG GGTTTCGACC ATCAACTGCA
GACTCTTTGC CAGTCATCGA CAAAATCGAG CGCGTATTTT TAAGCTTTGG TCATCAGCAT
TTAGGCTTAA CGCAAGCTGT CGTTAGTGCG CAAATGATTG CCAACTACTA TTTTGATGAA
GACCACACTA TCGATCCAAA ACCGTATCAA CTTGCCCGCT TTAAATAA
 
Protein sequence
MTISNFDLHI IGGGIIGLAT AVTLQARGVK VALLDANEVG QGASLGNAGH IATEQVFPIA 
DASMLRHVPA MLLNPTGPLR IDWRYLPRLM PWAMQLLMNM RPEPFERIHQ ALLSLNKNSL
QAWQGFANQW QLEEWVQVKG SLLTVEKTSS VDFLITHGSR LNDIGVANEL LTREALLERE
PALQDNQLAA LFFPNTGHIT NLKAVINQLH HIFRQLGGHV IEHCHVLAAT NDTDGIHLTT
SQGDMTASKV MLAAGAHSKA LAKQLTGVNV PLDTERGYHL MLPHESTRLQ IPVSSMDRRF
IMTPMQDGLR LAGTVEYAGL DAPANMQRAH MLLQQAQPIL KAPLDASDSV SWMGFRPSTA
DSLPVIDKIE RVFLSFGHQH LGLTQAVVSA QMIANYYFDE DHTIDPKPYQ LARFK