| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_1195 |
|---|
| Symbol | |
|---|
| ID | 4036013 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter cryohalolentis K5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007969 |
|---|
| Strand | - |
|---|
| Start bp | 1447456 |
|---|
| End bp | 1448889 |
|---|
| Gene Length | 1434 bp |
|---|
| Protein Length | 477 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637973660 |
|---|
| Product | L-serine dehydratase 1 |
|---|
| Protein accession | YP_580460 |
|---|
| Protein GI | 93006023 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG1760] L-serine deaminase |
|---|
| TIGRFAM ID | [TIGR00720] L-serine dehydratase, iron-sulfur-dependent, single chain form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.197277 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGATTAGTG TCTTTGATTT ATTCAAAATC GGCGTTGGCC CATCAAGCTC TCATACGGTT
GGTCCTATGA TAGCGGCTAA CTTGTTTGTA CAGTCACTCC TAAAGCAAAC CAATCTGAGC
GACATCCAGT CTTTAGAGAT TGAGTTATAT GGCTCGCTTG CGGCAACTGG TAAAGGACAT
GCTACAGATA CTGCCATATT ACTGGGCTTA CTTGGTCATG CACCTAGCAC CATCGATACG
CGTTTGACCA GTGAATATCT AGCACCGATC TTTTCAGACA ATCAACTCAA TATCGCAGGC
GAGCACGTTA TTGCTTTTGA TACAGAGCGT GATATTCACT GGTATGATGA GACGGTTCTA
CCTTATCATC CGAATGCTAT GACTATTCGT GTGTCTTTGG CGAATGGCAG CCATTATCAG
CAGACTTATT ATTCCGTAGG AGGTGGATTT GTTATCAATG AAGAAGATGC GACCAATCCT
GATGAAGATA ATGCAACGCC GACTATCGAT GTGATTCCTT ATCCTTTTAA TAGCGCCGCA
GAGCTATTAG AACAATGCCG TAAACATCAC TTGAGCGTGA GCGAGCTGGT ATTAGCAAAC
GAATGCCATT ACCGTGAGCA GGCAGAAGTA TTTGCGTATT TAGATTCTAT TTGGGAGTCG
ATGCAAGATT GTGTGACCCG TGGCTGCCAA AACAGCGGTA TTTTACCGGG TGGCTTAGAT
GTGAGACGCC GTGCTCAAGC ATTATACGTG CAACTGTGTG CTGAAAAAGA TCAGCCGATT
GCGCAAAATG ACAAATTGGT TGCGATGGAT TGGATTGATT TATATGCTTT AGCAGTCAAT
GAAGAAAACG CCAATGGCGG CAATGTGGTC ACCGCTCCTA CCAACGGCGC CGCAGGTATC
ATTCCTGCAG TGATGCATTA TTATCGCGAT TTTTTATCAA ACTATAGCCT TGATGGCGCG
CGCAAGTTTT TGTTAAATGC CACAGCAATT GGCAGCTTAA TCAAACAAAA CGCTTCAATA
TCGGGTGCTG AAGTTGGCTG TCAAGGTGAA GTCGGTTCAG CTTGTGCAAT GGCGGCGTCT
GCATTGGCAG AAATCCTAGG CGGAGATCCT GCTAAATGTC TTAATGCTGC TGAGATTGGT
ATCGAGCATA ACTTGGGTCT GACCTGTGAT CCTGTTGGTG GCTTAGTCCA AGTCCCTTGT
ATCGAGCGCA ATGCGATGGG CGCAGTCAAA GCAGTCAATG CTGCACGACT TGCCTGTCGT
GGTAACGGTC AACATTTTGT CTCTTTAGAC AAAGTCATTG AAACTATGAA AGTTACTGGT
GCTGACATGT TAGATAAATA CAAAGAAACT TCTCGCGGTG GATTGGCAGT ATATGCTGAC
AACCGTATAC CGACTGCCAC TCATGGCGTC AGCGTAAAAT ACAGCCAGTG CTAA
|
|---|
| Protein sequence | MISVFDLFKI GVGPSSSHTV GPMIAANLFV QSLLKQTNLS DIQSLEIELY GSLAATGKGH
ATDTAILLGL LGHAPSTIDT RLTSEYLAPI FSDNQLNIAG EHVIAFDTER DIHWYDETVL
PYHPNAMTIR VSLANGSHYQ QTYYSVGGGF VINEEDATNP DEDNATPTID VIPYPFNSAA
ELLEQCRKHH LSVSELVLAN ECHYREQAEV FAYLDSIWES MQDCVTRGCQ NSGILPGGLD
VRRRAQALYV QLCAEKDQPI AQNDKLVAMD WIDLYALAVN EENANGGNVV TAPTNGAAGI
IPAVMHYYRD FLSNYSLDGA RKFLLNATAI GSLIKQNASI SGAEVGCQGE VGSACAMAAS
ALAEILGGDP AKCLNAAEIG IEHNLGLTCD PVGGLVQVPC IERNAMGAVK AVNAARLACR
GNGQHFVSLD KVIETMKVTG ADMLDKYKET SRGGLAVYAD NRIPTATHGV SVKYSQC
|
|---|
| |