| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_1176 |
|---|
| Symbol | |
|---|
| ID | 4035382 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter cryohalolentis K5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007969 |
|---|
| Strand | + |
|---|
| Start bp | 1423215 |
|---|
| End bp | 1424144 |
|---|
| Gene Length | 930 bp |
|---|
| Protein Length | 309 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637973641 |
|---|
| Product | branched-chain amino acid aminotransferase |
|---|
| Protein accession | YP_580441 |
|---|
| Protein GI | 93006004 |
|---|
| COG category | [E] Amino acid transport and metabolism
[H] Coenzyme transport and metabolism |
|---|
| COG ID | [COG0115] Branched-chain amino acid aminotransferase/4-amino-4-deoxychorismate lyase |
|---|
| TIGRFAM ID | [TIGR01122] branched-chain amino acid aminotransferase, group I |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 12 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 0 |
|---|
| Fosmid unclonability p-value | 0.0000401768 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | unclonable |
|---|
| |
Sequence |
| Gene sequence | ATGAATATGG CAACAAAGGA AGGCAAGCTT TGGATGAATG GCACGATGAT TGAACAGCCA
GATGCCAAAA TTCATGTGCT TACGCACAGC ATGCATTATG GTATCGCAGT CTTTGAAGGC
GTCCGTGCCT ATCAAACCGC TGATAACCGT ACCGCGATTT TCCGCTTAAA AGAACATACT
GAGCGTCTGC TAGGTTCGGC AAAGATTTTC CAAATGGATG TGCCTTTTGA TGCAGCAACA
CTTGAGCAAG CACACAAAGA TGTGGTCAAG CAGAACAATC TAGCAGAAGC TTATATCCGC
CCGCTGATTT GGTTCGGTGC CGAAAAACTG GGTCTATCAT CACGTGATAA TAGCGTTAAT
GCCATGGTAG CTGCTTGGCA TTGGGGCGCG TACCTTGGTG AAGAAGGTAT CAAAAACGGT
ATTCGTGTAA AAACGTCATC ATATACCCAT CATTTGCCAA ACGTGACCAT GTGTAAAGCA
AAAGCCTCAA GTAACTATCC TGTATCTATC ATGGCAAACC AAGAAGTGAC CCGTAACGGC
TATGACGAAG CCATCTTGAT GGATCCACAA GGCTATGTCT GCCAAGGCGC TGGCGAGAAC
TTATTTTTAG TTAAAGATGG TGTATTGCAT ACCCCTGATT TAGCAGGCGG GGCACTTGAC
GGTATCACGC GTCGAACTAT TGTCCAATTT GCTGAAGATT TGGGCATTAA AGTTGTTGAG
CGCCGTATCA CTCGTGATGA GTTTTACTTA GCGGATGAAA TATTTATGAC AGGTACCGCT
GCTGAAGTCA CGCCTATTCG TGAATACGAT GATCGTACTA TCGGTAATGG TGGTCGCGGA
CCCTTGACTG AAAAGCTGCA AACCTTGTAC TTTGATGTGG TCCATGGTCG CAATGAGCAG
TATATGGATT GGTTAAGTTT TATTGACTGA
|
|---|
| Protein sequence | MNMATKEGKL WMNGTMIEQP DAKIHVLTHS MHYGIAVFEG VRAYQTADNR TAIFRLKEHT
ERLLGSAKIF QMDVPFDAAT LEQAHKDVVK QNNLAEAYIR PLIWFGAEKL GLSSRDNSVN
AMVAAWHWGA YLGEEGIKNG IRVKTSSYTH HLPNVTMCKA KASSNYPVSI MANQEVTRNG
YDEAILMDPQ GYVCQGAGEN LFLVKDGVLH TPDLAGGALD GITRRTIVQF AEDLGIKVVE
RRITRDEFYL ADEIFMTGTA AEVTPIREYD DRTIGNGGRG PLTEKLQTLY FDVVHGRNEQ
YMDWLSFID
|
|---|
| |