Gene Pcryo_1138 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_1138 
Symbol 
ID4033758 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp1374382 
End bp1377639 
Gene Length3258 bp 
Protein Length1085 aa 
Translation table11 
GC content47% 
IMG OID637973603 
Productbifunctional proline dehydrogenase/pyrroline-5-carboxylate dehydrogenase 
Protein accessionYP_580403 
Protein GI93005966 
COG category[C] Energy production and conversion
[E] Amino acid transport and metabolism 
COG ID[COG0506] Proline dehydrogenase
[COG4230] Delta 1-pyrroline-5-carboxylate dehydrogenase 
TIGRFAM ID[TIGR01238] delta-1-pyrroline-5-carboxylate dehydrogenase (PutA C-terminal domain) 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAACCCAG TAGAGCAATT TACCCCGCAA GAGCCGATTT TATTTAATCC TATTGATTTG 
TTATCACCAG AATATATTGC TCAGTCATCA ACAGAGCTAC ATACGCGTAT ATCGCCTTTG
TATAGCGTGG ATGAAGAGCG CTGGTTGACG CAGTTATTGC CACTTGCCAA ACCGACAGAT
GCCGAGCGTG ACAGTGCAGC TACGCAGACG CGTCAGCTGG TTGAGCATGT GCGCAATGAT
GGTAAAGCGG TAAAAATGGT CGACTCATTA TTGCTTGAGT ACAGCTTGGA TACCCAAGAA
GGTGTTTTGC TCATGAGCTT GGCGGAAGCC TTGATTCGTG TGCCGGACAA TTATACAGCT
GATGCGCTGA TTCATGACAA GATGAGCGTC GCTGACTGGA AAAAACATTT AAAAAATGAC
AATGGTTTTA TGGTCAATGC CTCAACGTGG GGCATGATGA TGACAGGTCG TGTGGTGAGC
ATCGATAGTG ATACCACGGC ATCTGGATTT TTGGATCGTA TGACCAAAAA GATGGGTGAG
CCTGTTATTC GTAGTGCTAT GCAAAAAGCC ATGCGTATCA TGGGACATCA GTTTGTACTT
GGCGAAACGA TTGAAGGCGC TAATAAAAAT AGCCAGCCAT ATCGCAATAA AGGCTATACC
TACTCATTTG ATATGTTGGG TGAAGCGGCA ATTACTCATA AAGATGCTGA AAAATACTTT
AATGATTATT TGCATGCTAT CAAAGCCACC GCAAGTGTGA AAGTTAAAGA GGGCATGCCG
AAGCCATCAG TTTCTATCAA GCTGTCCGCA TTGCATCCGC GTTATGAAGC CACCCAAGAA
GAACAAGTCA TGGGGCTGTT GCGTCAACGC TGCTTGTTAC TGATTGAAGC GGCGCGTGAA
GTCAATGTCG ACCTCAGTAT CGATGCTGAA GAAGCCGATC GTCTTGAGAT ATCGCTAAAA
CTATTTGAAT CTCTATACCG CGACAATCTA ACAGCGGATT GGGATGGTCT TGGTTTAGTT
GTACAAGGTT ACTCAAAGCG TGCAATTGCT ATTTTGTCTT GGCTGGCACG CTTGGCAACT
GAGGTTGGCG ACCGTATTCC TGTACGTCTA GTAAAGGGCG CTTATTGGGA TACAGAAATC
AAGTTGGCGC AGCAAAAAGG TCTATCAGGC TATCCGGTTT GGACGCGTAA AGAAGGCACG
GATACCGCTT ATCTTGCCTG CGCACGTTTC TTATTATCAG AGCATTTGCG TGGTCTTATT
TGGCCACAGT TTGCAACGCA CAATGCGCAC ACGCTTGCTT CAATCATGAC CATGAGCTCG
CACAGAGACT TTGAGTTCCA GCGTCTCCAT GGTATGGGTG ATGCGCTTTA TGACCATATC
TTACAAGCTT ATCAAATTCC TGTGCGTATC TATGCACCGG TTGGCGCTCA TAAAGATCTG
CTGCCGTATT TGGTACGTCG ATTGCTCGAA AACGGTGCCA ATAGCTCGTT TGTCCATCAG
TTATTAGACA AGTCTTATCC AATTGACAAG CTAACTGTAC ATCCGTATGA CAAGCTATTA
ACCAATGCAA CGCTACATAA TCCAGATATT CCATTACCGT TAGCTATCTA TGGCGCACGC
CGTGCCAGCT TTGGTCCCAA TATCTTTGTA GAATCGCAGT GGATACCGTT TAAAGCAGCT
ATCGATACGC ATATACACAA AACATGGTCT GCGACTTCTG TTATTAATGG CAACGCAGTC
AATGACAATA CGGTAGATGG CGACACTCAT CAGCTTGACA AGCAAGCTAT ATGTGCGCCT
TGGAACCATG AAGTCATTGC CGGTGAAGTC GTCTATGCCA ATGCTACTAT CGCACAGCAA
GCAATTGCGG CGGCAGTTGC TGGACAAGGC GAATGGCAAG CGGTTGCTGC TACTAAACGT
GCGGCTATAT TGCGTAAAAT CGCGGACTTG TATGAAGAAA ACTATGCAGA GCTGATGGCA
TTATGCCAAG TTGAGGCAGG TAAAACCTTA CAAGACAGCA TTGATGAAAT CAAAGAAGCG
GTTGATTTTT GCCGTTTTTA TGCTGATGAA GCTGAGCGTT TAGATGATGT TATTTATGAG
TTTACCGATT TGGCAGGCAA GCCGTCGCGT CAAGTTTATA AAGCACGTGG CACCTTTATT
TGTATCAGCC CATGGAACTT TCCATTGGCT ATTTATACCG GTCAAGTAGT TGCAGCACTG
GCTGCAGGTA ATACCGTAGT GGCAAAACCT GCCGAACAGA CGAGCTTAAT CGCTCATTTC
GGTGCGCAGC TTATGTATCA AGCTGGCGTG CCAGTAGAAG CATTGCAACT CGTGATTGGC
GCGGGCGACG TTGGTGCTGC ATTGACTGCT GCGGACAATA TCGCAGGTGT TATCTTTACA
GGTTCGACCC AAACGGCGCA GCGCATCAAC CAAAGCCTAA ATGCCCATGC TCAAGTCAGT
GGTGAGCTGC CTGTCTTTAT CGCCGAGACT GGCGGACAAA ATGCCATGAT TATGGACTCA
ACGGCATTGC CTGAGCAAGT GGTTAGAGAT GCGGTATTAT CTGCCTTTGG TTCAGCAGGT
CAGCGCTGTT CAGCATGTCG TATCTTATGT GTACAAGAAG AGATGGCAGA TGATTTGATT
GAGCTATTGC AAGGCAATAT GGCTGAATTA ATCGTTGGCA ACCCGCTATA TGCGACTACA
GATGTAGGTC CTGTGATTGA TATTGATGCC AAGCGCGGAC TTGAAGCGCA TATCGAACGC
ATGCGCGCTG AGCCAACGGC TACGATTTTG GCGCAGACAC CGATGAGTGA TAGCTCAGAG
GTCAGTCAAG ATCAAGCAAC GTTTGTATTG CCAACGGCGA TAGAAGTAAA AAGTATCGAT
GTGATCGGTG GAGAGCATTT TGGTCCTATT TTGCATGTAC TGCGTTATGA AGCACGTGAT
CTAAATAAGC TGATTGATGC AATCAATGCG ACGGGTTTTG GTTTGACCTT GGGCATCCAT
AGCCGTATTG AAAACACAGT AGAGCATATC GAGCGCCGAG CCTTTGTCGG CAATACTTAT
ATCAACCGTA ACCAAATCGG CGCGGTCGTC AACGTACAGC CGTTCGGTGG CTGCGGTCTA
TCGGGCACAG GTCCCAAAGC AGGTGGTCCA CATTATGTCG CCCGTCTGAT GAGCTTAACG
ACAGAGCAGT TGGCTAATGA GCAAGTGGCT CTGATAGACA ATACCGCTGC AACCAGTACT
CAAACAATAA TCGCATAA
 
Protein sequence
MNPVEQFTPQ EPILFNPIDL LSPEYIAQSS TELHTRISPL YSVDEERWLT QLLPLAKPTD 
AERDSAATQT RQLVEHVRND GKAVKMVDSL LLEYSLDTQE GVLLMSLAEA LIRVPDNYTA
DALIHDKMSV ADWKKHLKND NGFMVNASTW GMMMTGRVVS IDSDTTASGF LDRMTKKMGE
PVIRSAMQKA MRIMGHQFVL GETIEGANKN SQPYRNKGYT YSFDMLGEAA ITHKDAEKYF
NDYLHAIKAT ASVKVKEGMP KPSVSIKLSA LHPRYEATQE EQVMGLLRQR CLLLIEAARE
VNVDLSIDAE EADRLEISLK LFESLYRDNL TADWDGLGLV VQGYSKRAIA ILSWLARLAT
EVGDRIPVRL VKGAYWDTEI KLAQQKGLSG YPVWTRKEGT DTAYLACARF LLSEHLRGLI
WPQFATHNAH TLASIMTMSS HRDFEFQRLH GMGDALYDHI LQAYQIPVRI YAPVGAHKDL
LPYLVRRLLE NGANSSFVHQ LLDKSYPIDK LTVHPYDKLL TNATLHNPDI PLPLAIYGAR
RASFGPNIFV ESQWIPFKAA IDTHIHKTWS ATSVINGNAV NDNTVDGDTH QLDKQAICAP
WNHEVIAGEV VYANATIAQQ AIAAAVAGQG EWQAVAATKR AAILRKIADL YEENYAELMA
LCQVEAGKTL QDSIDEIKEA VDFCRFYADE AERLDDVIYE FTDLAGKPSR QVYKARGTFI
CISPWNFPLA IYTGQVVAAL AAGNTVVAKP AEQTSLIAHF GAQLMYQAGV PVEALQLVIG
AGDVGAALTA ADNIAGVIFT GSTQTAQRIN QSLNAHAQVS GELPVFIAET GGQNAMIMDS
TALPEQVVRD AVLSAFGSAG QRCSACRILC VQEEMADDLI ELLQGNMAEL IVGNPLYATT
DVGPVIDIDA KRGLEAHIER MRAEPTATIL AQTPMSDSSE VSQDQATFVL PTAIEVKSID
VIGGEHFGPI LHVLRYEARD LNKLIDAINA TGFGLTLGIH SRIENTVEHI ERRAFVGNTY
INRNQIGAVV NVQPFGGCGL SGTGPKAGGP HYVARLMSLT TEQLANEQVA LIDNTAATST
QTIIA