Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_1127 |
Symbol | |
ID | 4033670 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | + |
Start bp | 1360042 |
End bp | 1361232 |
Gene Length | 1191 bp |
Protein Length | 396 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 637973592 |
Product | pseudouridine synthase, RluD |
Protein accession | YP_580392 |
Protein GI | 93005955 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG0564] Pseudouridylate synthases, 23S RNA-specific |
TIGRFAM ID | [TIGR00005] pseudouridine synthase, RluA family |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.965473 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACTACCA ATTTACCCGC GAACCAATCC ACTGAAGATT CATCAATGAC AGACTTATCA ACGCAAGGTT CACCTGTGCC AGAATCCACG ATACCCAATG AATTATTAAC CATCAATGAG CAATTTGACG AGCATATGGA CGATGATAAC GTGTCAGATG ATGAGTTGCT TAATGACGAA GACGAGCATG GCGATAATGA AGTCTCGGTC GCAGGGCAAT CTGTGCCTGT TGTGGTTGAC GTGAAGCATA CGGTCATAGA AGACGAAGCA GGTTTGCGTA TTGATAAACT GGCATCAAAA ATATTTACCG ATTTTTCACG TGTCCAGTTA CAAGGCTGGG TAAGTGATGG CAGCTTGCTC TATAACGGTA GCATACAAAA ACCTAAGATC CGTGTTAAAG CTGGCGATAT CTTGCATCTG TCGACGACTT TAGAGCAGCA TAGCGAAGAT CAGCCAGAAG ATATCGCAAT CGACGTGGTT TATGAAGATG ATGACGTATT GGTCATCAAT AAGCCAGTCG GCATGGTGGT ACATCCAGGT GCCGGTAATC AAACAGGCAC TTTGGTAAAC GCGCTATTGT ATCACTATCC GCAGCAGCAC CATTTGCCGC GTGCAGGTTT GGTACACCGT ATTGATAAAG ATACTTCAGG GCTATTATTG ATTGGTAAAA CCAAACCCGC ACAGCTGGCA CTGATGGAGC AGCTAAAGGA CAAGTCAGTG TATCGTCATT ACCAATGTGT GGTCGCAGGG GATGCAGCGA GTCTATCTCG TCATCGCCGT ATTGACGCGC CCATTGGACG CCATCGTAAT CAGCGTACCA AAATGACGGT GATGACGGCA GGACGCGAAG CTGTGACTCA CCTGTTGAAT GTAACCGCGC TTAATGGTAA CTATTGTTTG TTGGATATAG GGCTTGAGAC AGGGCGTACG CATCAGATTC GTGTGCATCT GAGCCATATT ACTTATCCTA TTGTTGGTGA TAGAGTCTAT GGCGGTCGTC GTCAGCTACG TGCTGGTCTA ACAGAAGCGC AGCGTCAAGC GATTAATAAC TTCCCGCGTC AAGCACTCCA TGCTTATACG TTGGGTTTCG TCCATCCAAC GACTGGTGAA GACGTTGAGG TCACTACACC AATGCCTGAA GATATGCAGC AGCTAATGGC AGTATTAAGT GACGGCTATG ATGAAGAATA A
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Protein sequence | MTTNLPANQS TEDSSMTDLS TQGSPVPEST IPNELLTINE QFDEHMDDDN VSDDELLNDE DEHGDNEVSV AGQSVPVVVD VKHTVIEDEA GLRIDKLASK IFTDFSRVQL QGWVSDGSLL YNGSIQKPKI RVKAGDILHL STTLEQHSED QPEDIAIDVV YEDDDVLVIN KPVGMVVHPG AGNQTGTLVN ALLYHYPQQH HLPRAGLVHR IDKDTSGLLL IGKTKPAQLA LMEQLKDKSV YRHYQCVVAG DAASLSRHRR IDAPIGRHRN QRTKMTVMTA GREAVTHLLN VTALNGNYCL LDIGLETGRT HQIRVHLSHI TYPIVGDRVY GGRRQLRAGL TEAQRQAINN FPRQALHAYT LGFVHPTTGE DVEVTTPMPE DMQQLMAVLS DGYDEE
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