| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_1126 |
|---|
| Symbol | |
|---|
| ID | 4033669 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter cryohalolentis K5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007969 |
|---|
| Strand | - |
|---|
| Start bp | 1358205 |
|---|
| End bp | 1359284 |
|---|
| Gene Length | 1080 bp |
|---|
| Protein Length | 359 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637973591 |
|---|
| Product | putative lipoprotein (DUF0169) |
|---|
| Protein accession | YP_580391 |
|---|
| Protein GI | 93005954 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4105] DNA uptake lipoprotein |
|---|
| TIGRFAM ID | [TIGR03302] outer membrane assembly lipoprotein YfiO |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.926748 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCAAGCTG TTGGCAATAC GTTTATCAAA CTGTCCTCAA TCACTTTACT TGCCCTAAGT
GTCAACTTAG TGGGTTGTCA AACCTTTAAA AACCTCACCG GCGGTAAAGA CGTGGATGCA
GTGGTCACTG CTGAGAAGTC AGAGCAAGCG TACTATAATG ACGCGATTGC TCAGATTGAT
AAAGGTCGCT ATACCCAAGC GATCGAAGAT TTAACCAACT TGCGCACTTT TTATCCGACT
GGACAATATG CCGAGCAATC TTTGCTCGAT ATGATGTATG CACAATATGC CAGTGGTAAA
TATGAAACTG CGGCTGCCAG TGCTGAGCAG TTCATTCGTC TTTATCCGTC TAACCCGCAA
GTGAGCTACG CTTACTATGT GCGCGGCGTT GCCAATATGC AAGGCTCGTC TGAGGGTTTA
AAACTGTTTA AGCTCAACCA AGCGGAGCGC GATACTGCTT ACTACCGTAT TGCTTTCGCC
AATTTCCAAG AGCTGTTGAA CAAATATCCA AACAGTCCTT ACGCACCTGA TGCCGCTCAG
CGCATGACGT TTATTTATAA TCAGTTTGCC GAAAGTGAGA TGAGCGCTGC TAATTGGTAT
ATTGAGCGTG AAGCTTATGT AGCTGCTGTC AATCGTGCCA AATGGGTCTT TCAATATTAT
CCACTCAGCG AATCTGTGCC AGATGCGATT GCCGTCCTTG CTTATAGCCA TGAAAAATTA
GGTCTAACTG ATTTAGCAAA CGAGTATAAA ACTTTATTGC AAATTAACTA TCCGAACATG
CTAAGCGCTG ATGGACGTGT CAAGCTCAAT ACCAAACGTG AGCGTTCTCT AGTGAACAAA
CTAACTTTTG GACAGCTGAG TCGTTTTGAT AAAGACACCA CAGTTTCGAC TGGCAATTAT
AGCGGTGCGA CCAAAACTCA AGTCATTCGC AATGCCACTC AACTGAGATT GCCAAGCGAC
AATGCGGCAA ATACAGCAGC GCCAAGCAGC ACTTCTCCGC TGCGTCTGAC TGATGACAAT
CGCCGTGTAC GCTTAGGGGC GGTTGAAAAT GACAGCATCG ATATGACCGA TAGCAATTAA
|
|---|
| Protein sequence | MQAVGNTFIK LSSITLLALS VNLVGCQTFK NLTGGKDVDA VVTAEKSEQA YYNDAIAQID
KGRYTQAIED LTNLRTFYPT GQYAEQSLLD MMYAQYASGK YETAAASAEQ FIRLYPSNPQ
VSYAYYVRGV ANMQGSSEGL KLFKLNQAER DTAYYRIAFA NFQELLNKYP NSPYAPDAAQ
RMTFIYNQFA ESEMSAANWY IEREAYVAAV NRAKWVFQYY PLSESVPDAI AVLAYSHEKL
GLTDLANEYK TLLQINYPNM LSADGRVKLN TKRERSLVNK LTFGQLSRFD KDTTVSTGNY
SGATKTQVIR NATQLRLPSD NAANTAAPSS TSPLRLTDDN RRVRLGAVEN DSIDMTDSN
|
|---|
| |