Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_1112 |
Symbol | |
ID | 4033655 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | + |
Start bp | 1338351 |
End bp | 1341416 |
Gene Length | 3066 bp |
Protein Length | 1021 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 637973577 |
Product | lytic transglycosylase, catalytic |
Protein accession | YP_580377 |
Protein GI | 93005940 |
COG category | [R] General function prediction only |
COG ID | [COG3858] Predicted glycosyl hydrolase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.0269179 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 4 |
Fosmid unclonability p-value | 0.029477 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCTACTG TGTCATCAAA CTATCGCTCA TTTATAGCTT TACCATTGAC GCTTGCGGTG TCAACTCTTC TTATCAGTGC GTGTAGTAAT ACATCAGCGG TGAAAAAGAC GGGGGCGACT GGCAGCACAG CTGTGGTTAA GCGTCCTACC ACGCAAGTTC AGCCAACGGG AAATGCAGAT TATTCGACTG CATTTTTGGA TGCTGAAAGC TTAGATGAGC TTGCTGATTT ATTGGAAGCC ACTGATATGA CTATGGTTGA GGGCAACAAA CTTGCTATTC AACAATATGG TGACTTGTGG AATCGCCTGC GTGCTGGGTA TCGGATGAAC GGTGGACAGC CGGTTTATAA TCAGCGTATT GAAGCACAAA AAGGCTGGTT TACCAGTAGA CAGGACTATC TAAACCGTTT AACAGCGCGT GCCAGTCGCT ATATTTATCA CACAGTAAGA GAGGCAGAGC GTCGCAATAT CCCAACCGAG CTGGCTTTGC TGCCTGTGAT TGAGAGCTCC TACGATCCAA GTGGTACCAG TAGTGCGGCA GCGGCAGGTT TATGGCAGTT TATTCCGAGT ACGGGACGTA TTTATGGTCT AAATCAAAGC AGTACATATG ATGGTCGCCG TGATGTGATT GAGTCAACAC GTGCCGCTTA TGACTTTTTG ACGGCATTGC ACAATCAGTT TGGTAGTTGG GAGCTGGCAT TAGCCGCTTA TAATGCCGGT CCTGGTCGTG TGCAAAAAGC CATTGATGCC AATAGAGCTC AAGGTTTACC TACCGACTAT TGGTCACTCA GATTACCGAC TGAAACCATG AACTATGTAC CACGCTTTTT GGCAGTTGCC GAAATCGTTG CCAAACCTGA AAAATACGGT GTCTATTTGC CGGCTATCGC TAACCGTCAG CATTTCCGTA GTGTGCCTGT CAACTATGGC GTAAGCTTAG CCGAAGTATC GCAAGTCACG GGTGTTAGCT ACGATGAATT AGAAAGATTA AATACGGCGT TAACCTCAGC ACGTATCGAT TCATCAGGTC CGCAGCGTAT TATTATTCCT AATGATGTCA GTCTGACCAC TGATGTGAAG CTGAGCGCTT TGAGGGGTAA TGGCAGTAGT AATATTCTCG CCTCTAGCAA TGCTGTTACG ACGACTACGC CAAGCTACTC TGGGTCAACA ACGCCAAGCT ATAATAATAG GCCATATACT ACCAGCTCAT CATTACCCGG TACTGGCAAA GGTCTTGCTG ACTATGCTGC CAGTGCGAGC GTCCCGCAGC AAACCACCAG CTATATTCCG CCATCGTCAT CAACGACCAG CAGCTCAGTT TATAGCAGCA GTGCCTCAGT GCGTACAGAG CCACCTTTAA CCTCAGCAGA GACCAAAAAA ATCAATGCTG AGCTGAAAAG TAGTAACAGC TTACCGACCA CATCAGCGCA AATCACTCAA AACAATACCA TCATTCAAGA GCCGCCGCTA AGTAAAGCGG AGCGTGATTT TATTGCCAAT CAAATTCGTA TTAATACGCC TGAAACCAAT GTCATTAACG CCGATGGTAA TATTAATTTA TCTGCCGTGC AGACGCAGCA GTCCGTCTTA GAAGCCACGG GACAAGAGAA GAAACTGAGC TTCCCAAAAA CCTCAGTTAG TAAGCCAAAA CCACAAGGCA CACGTACCAC TTATACGGTC AAACGCGGTG ATACTTTGGT TAATATTGCC AGTCGCTCTG GTGTGAGCTG GCGTGATATT GCCGAATGGA ATCAGATGGA TGCCAGTGCC AAGCTACTCT CTGGTAGTAC TTTGTATCTA TATAATGCCA AAACTATCGA GCCATTGAGC GCTACCAGCA GCACTGTCGC GAGCCAGCCT GAAAGTTATG TGGTACAAGG TGGCGATACG CTTATAGGTA CTGCCAATCG CTTTGGTTTA TCAGTGACGC AGTTAGCAAG TTATAATAAT TTGAGCAGCC GTGCAGACTT ATTAAGAGGT CAGAAACTAT GGCTTATCCC AGGCAAAGTA ACAGCACCAG TCAGCACTCC TGCCGCGCCA TCTACTAAAC CCAAGAAGTC ATCGACTGCG ACCAAAAACT ATAAAGTAAA AGCAGGTGAT GGCTTGATTG CACTTGCACG CCAATTTAAT ATAACGACTG AGACATTGGC CAGTCTTAAT GATATTGGTA CGACAGATTC ATTATACGTC GGTCAAACCT TAAAAGTACC TGCCAGTGTA GACTTTACTT CTAACAGTGC GCCTACTGCT ACACAGAGCA CTGCTAATAG CAATAACACC ACAACCAAAG CCAGCAGTTC AAGTTCAGTG CCGACTAGCA ATTATAAAGT CAAATCAGGG GATACCTTGA TTGGCATTGC TAATAGTGTT GGGGTCAGCG CAGAAGATAT TGCTGCCGTA AACAGTAACT TTGATGCTAA GGCGCGTTTG CAACGTGGAC AAACGATTAA AGTTCCTGTA TCAAAAGAAT TGGTTGATCG TCAGCTAAAT GATGAGGCAG TCAGCTACAA GGTAAAATCA GGCGATACTT TGACGGGTGT TGCTCAGCGT TACAATATTG GCTTGGGTGA TTTGGCAGCA GCTAACAATC TCAAGACCAA TTCTAACTTG ATCTTAGGTC GCACGATTAC CATTCCTGCT AAAGGTAGCG TGAGTACTAG TGCCAATGCT GCGGCCAGTA GCAAGAGCAG TAGTTCGGTG AGCACAGAGA CAAATAGTAA GTCTGATAGC GCGCCAGCTA CCAGTAATAG CGGCAAAAAG CTCGGCAACA CAGAAAGCTA TAAGGTGCAG TCTGGCGATG GACTCATCGC TTTAGCACGC CGCTTCGGTG TTTCAGTTGA AGACTTGGCT GCTACCAATG ATATTTCGAC TAAAGCTCAG TTACAACGTG GTCAGACCAT CAAAGTGCCG AAATTAACGG TCAGCTATAC GGTTGGCTCA GGAGACAGCT TAATTGGTTT GGCACGTAAA TACGACGTTT CAACCAAAGA GCTTGCGGAT ATGAATGACA TTGCAGTCGA TACCATGCTG CAACGTGGTC AACGCTTAAC GGTGCCTAAT CGCTAA
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Protein sequence | MSTVSSNYRS FIALPLTLAV STLLISACSN TSAVKKTGAT GSTAVVKRPT TQVQPTGNAD YSTAFLDAES LDELADLLEA TDMTMVEGNK LAIQQYGDLW NRLRAGYRMN GGQPVYNQRI EAQKGWFTSR QDYLNRLTAR ASRYIYHTVR EAERRNIPTE LALLPVIESS YDPSGTSSAA AAGLWQFIPS TGRIYGLNQS STYDGRRDVI ESTRAAYDFL TALHNQFGSW ELALAAYNAG PGRVQKAIDA NRAQGLPTDY WSLRLPTETM NYVPRFLAVA EIVAKPEKYG VYLPAIANRQ HFRSVPVNYG VSLAEVSQVT GVSYDELERL NTALTSARID SSGPQRIIIP NDVSLTTDVK LSALRGNGSS NILASSNAVT TTTPSYSGST TPSYNNRPYT TSSSLPGTGK GLADYAASAS VPQQTTSYIP PSSSTTSSSV YSSSASVRTE PPLTSAETKK INAELKSSNS LPTTSAQITQ NNTIIQEPPL SKAERDFIAN QIRINTPETN VINADGNINL SAVQTQQSVL EATGQEKKLS FPKTSVSKPK PQGTRTTYTV KRGDTLVNIA SRSGVSWRDI AEWNQMDASA KLLSGSTLYL YNAKTIEPLS ATSSTVASQP ESYVVQGGDT LIGTANRFGL SVTQLASYNN LSSRADLLRG QKLWLIPGKV TAPVSTPAAP STKPKKSSTA TKNYKVKAGD GLIALARQFN ITTETLASLN DIGTTDSLYV GQTLKVPASV DFTSNSAPTA TQSTANSNNT TTKASSSSSV PTSNYKVKSG DTLIGIANSV GVSAEDIAAV NSNFDAKARL QRGQTIKVPV SKELVDRQLN DEAVSYKVKS GDTLTGVAQR YNIGLGDLAA ANNLKTNSNL ILGRTITIPA KGSVSTSANA AASSKSSSSV STETNSKSDS APATSNSGKK LGNTESYKVQ SGDGLIALAR RFGVSVEDLA ATNDISTKAQ LQRGQTIKVP KLTVSYTVGS GDSLIGLARK YDVSTKELAD MNDIAVDTML QRGQRLTVPN R
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