| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_1107 |
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| Symbol | secF |
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| ID | 4033689 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter cryohalolentis K5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007969 |
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| Strand | - |
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| Start bp | 1331757 |
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| End bp | 1333001 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 637973572 |
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| Product | preprotein translocase subunit SecF |
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| Protein accession | YP_580372 |
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| Protein GI | 93005935 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0341] Preprotein translocase subunit SecF |
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| TIGRFAM ID | [TIGR00916] protein-export membrane protein, SecD/SecF family
[TIGR00966] protein-export membrane protein SecF |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0908186 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.232496 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCAATCG ATAATAACAA TCCTCTAGAA AAACAGAACA ATCCAGAACC CAACGGCTCA
AATAGTGAAG CAAGTGGGCG TGGGCGTAAA AAACCGCGCC GTGATGGCAA AGGTAGCAAT
ACCCAAACCA ATAACGCCAC TGCTAAGAAA TCAGCCAGTA AAACTCAGCG TACTGGCAAA
GGCGCTAATA AAGACAGTCA AGTATTCGCG ACTACTGCTC TTGATCCTAG CTTAGCATTA
GGTGATGCCG CTGAAGATGC TGCTGCCTAT GCCGAAGGGG GTATCAAAGC CGTCGGTGAT
CAGCGTATCA TCCCTTTTAT GAAGCTAGAA AAGCCAATGG GCATTTTATC AATCATTTTG
GTGATTGGTA GTATCATTGC AATTGCGGTC AATGGCTTGA ACCTTGGTCT TGATTTTACC
GGTGGCGTGT CAGCAGATGT GCGCTATGAG CAATCCGTTG AGCAAGGTGA TGTGGTTACT
GCGTTGGCAG ATAATGGCTT TGATGATGCA GTCGTGCAGT ACCTAGGCAC CTCGCAAGAG
CTGCTAATAC GTTTGCCGCC TCAATCTGAT AACATTGATG GTCTTAACAA CAGCTTGAGC
GAAGCGTTAG CGCTACCTAA TAACGATGTT GAAATCAGCA ACGTGAATAT TATCGGTAGT
CAAGTTGGTA ACGAGATCTA TTTAAGCTCA GTCATGTCAA TTGTGCTTGC ACTAGCGTGT
ATGCTGGGAT ATGTCGCCCT GCGCTTTCAG TTCAAACTGG CACTTGGCGC GGTATTGTCC
TTGTTCCATG ATGCTATCGT GACCATCGGT GTCTTTGCCT TATTTGGCTT CCCATTCGAT
TTAACAGTAC TAGCAGCCAT CTTGGCATTG ATTGGTTATT CATTGAACGA TACCATCGTT
GTCTATGACC GTATCCGTGA AAATTTCCGC CGTGTCCGCG GGATCAGTCC GCGTCAAACC
ATTGATTTGT CATTAACAGA GACACTACGC CGTACGATTA TGACTATCTC AACCGTGCTA
TTAGTGGTAT TAGCAATGCT GTTCTTGGGC GGTGATGGCT TATTCTGGTT CTCAGCGGCA
CTGTTTATTG GTTTACTTGC TGGTACTTAT TCCTCTACCT ATATTGCAAG CTCGATTCCT
CTAGCGATGG GTCTGTCACG TGATGACTTT ATCGTCAAAG TAAAACCTGA GTTTGAAGAA
GAAATCGTGA CTTTCAATGA TCCAAAGATG TTTGAACAAG ATTGA
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| Protein sequence | MAIDNNNPLE KQNNPEPNGS NSEASGRGRK KPRRDGKGSN TQTNNATAKK SASKTQRTGK
GANKDSQVFA TTALDPSLAL GDAAEDAAAY AEGGIKAVGD QRIIPFMKLE KPMGILSIIL
VIGSIIAIAV NGLNLGLDFT GGVSADVRYE QSVEQGDVVT ALADNGFDDA VVQYLGTSQE
LLIRLPPQSD NIDGLNNSLS EALALPNNDV EISNVNIIGS QVGNEIYLSS VMSIVLALAC
MLGYVALRFQ FKLALGAVLS LFHDAIVTIG VFALFGFPFD LTVLAAILAL IGYSLNDTIV
VYDRIRENFR RVRGISPRQT IDLSLTETLR RTIMTISTVL LVVLAMLFLG GDGLFWFSAA
LFIGLLAGTY SSTYIASSIP LAMGLSRDDF IVKVKPEFEE EIVTFNDPKM FEQD
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