Gene Pcryo_1103 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_1103 
Symbol 
ID4033685 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp1327330 
End bp1328865 
Gene Length1536 bp 
Protein Length511 aa 
Translation table11 
GC content45% 
IMG OID637973568 
Productamidophosphoribosyltransferase 
Protein accessionYP_580368 
Protein GI93005931 
COG category[F] Nucleotide transport and metabolism 
COG ID[COG0034] Glutamine phosphoribosylpyrophosphate amidotransferase 
TIGRFAM ID[TIGR01134] amidophosphoribosyltransferase 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.414294 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTGTGGAG TCGTTGGGGT CGCAGCTCAT GAGCCGGTCA ACCAAATTTT GTATGATGCC 
TTAACCATGT TGCAGCACCG TGGGCAAGAT GCGGCAGGTA TTGTGACTTT ACAGGATGGA
CGTTTATATT TACGCAAAGA AAACGGCATG GTACGTGACG TTTTTATGAA TCGCCATATG
TTAAAGCTGG TCGGTAAATT CGGTATCGGT CATGTGCGTT ATCCGACTGC TGGCACGTCA
AGCAGTGCTG AAGCGCAGCC TTTTTATGTC AACTCGCCTT ACGGTATCAC GCTGGCACAT
AATGGTAACT TGACCAATGC TGAGAGCTTG GCGAAGTCGC TTTATCAAGA AGATCGTCGT
CATCTAAATA CCGACTCAGA TTCTGAGGTT TTGCTCAATG TGCTGGCACA TGAAATGCAA
AATCTAGGCA AAACCCATCC AACGCCTGCT GACATCTTTG AAGCAGTGAC AGCGGTTTAT
GGTCGTGTTG AAGGCGCTTA TGGCGTAGTC GCTTTGATTA CTGGTCATGG TTTGCTAGCA
TTTCGTGATC CAAACGGTAT TCGTCCGCTC ATCTTTGGTA AGCGCATGGC TGCCAATGGC
GGCACAGAGT ACATGGTAGC ATCAGAATCG GTTGCTTTGA CCGGTTCAGG TTTTAGTATT
GTTCGTGATG TTAAGCCCGG CGAAGCTATA TTTATTGATT TAGACCATAA ATTACATACG
CATCAGTGCG TTGAGCAAAA AGAATATACA CCTTGTATCT TTGAATATGT GTATTTTGCC
CGTCCAGATT CTATTATGGA CAATATCTCC GTTTATAAAT CACGCCTACG TATGGGTGAA
AAACTGGCCG ATAAAATCCT TGCTGAATGG GGTGAAGATC ATGATATCGA TGTGGTCATT
CCTATTCCTG ATACCTCGCG TACCTCAGCG ATGGAGCTAG CGCTAAAGAT GAATATCAAG
TACCGTGAAG GGTTTATGAA AAACCGCTAT ATCGGTCGCA CCTTTATCAT GCCAGGTCAG
CAGCAGCGCA AAAAGTCAGT GCGTCAAAAG CTTAGTGCGG TACCATTAGA GTTTAAAGGT
AAAAACGTAC TCTTGGTTGA CGATTCAATC GTCCGCGGTA CAACCTGCCA TGAGATTATC
CAAATGGCAC GCGATGCAGG CGCGCGCAAG GTATTCTTTG CCAGTGCAGC GCCACCGGTT
AAGTATCCAA ATGTCTATGG TATTGATATG CCAGTGCGTA GCGAACTTAT TGCGTCAGGA
CATAGCGTTG AAGAAGTGCG TGATATCATC GGTGCTGACC GCTTAATTTT CCAAGATTTG
GACGATTTGA TTGAAGCGGT CAAAGACACT AAGCATAGTA AAGTTGAAGG TTTTGATTGT
GCCGTATTTA ATGGCTGCTA CATCACTGGT CAAATCAATG AAGCGTATCT TGAGCATCTG
CAAGAGCAGC GTAACGACAC TGCTAAAAAG GGTAAAAAAG GGCTACAAAT AGTCGCTGAT
ACGCCAGTAG ATATGATGGG TGTAGAAGAA CTTTAA
 
Protein sequence
MCGVVGVAAH EPVNQILYDA LTMLQHRGQD AAGIVTLQDG RLYLRKENGM VRDVFMNRHM 
LKLVGKFGIG HVRYPTAGTS SSAEAQPFYV NSPYGITLAH NGNLTNAESL AKSLYQEDRR
HLNTDSDSEV LLNVLAHEMQ NLGKTHPTPA DIFEAVTAVY GRVEGAYGVV ALITGHGLLA
FRDPNGIRPL IFGKRMAANG GTEYMVASES VALTGSGFSI VRDVKPGEAI FIDLDHKLHT
HQCVEQKEYT PCIFEYVYFA RPDSIMDNIS VYKSRLRMGE KLADKILAEW GEDHDIDVVI
PIPDTSRTSA MELALKMNIK YREGFMKNRY IGRTFIMPGQ QQRKKSVRQK LSAVPLEFKG
KNVLLVDDSI VRGTTCHEII QMARDAGARK VFFASAAPPV KYPNVYGIDM PVRSELIASG
HSVEEVRDII GADRLIFQDL DDLIEAVKDT KHSKVEGFDC AVFNGCYITG QINEAYLEHL
QEQRNDTAKK GKKGLQIVAD TPVDMMGVEE L