| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_1088 |
|---|
| Symbol | |
|---|
| ID | 4034697 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter cryohalolentis K5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007969 |
|---|
| Strand | + |
|---|
| Start bp | 1311241 |
|---|
| End bp | 1313076 |
|---|
| Gene Length | 1836 bp |
|---|
| Protein Length | 611 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 44% |
|---|
| IMG OID | 637973553 |
|---|
| Product | trifunctional thioredoxin/methionine sulfoxide reductase A/B protein |
|---|
| Protein accession | YP_580353 |
|---|
| Protein GI | 93005916 |
|---|
| COG category | [C] Energy production and conversion
[O] Posttranslational modification, protein turnover, chaperones |
|---|
| COG ID | [COG0225] Peptide methionine sulfoxide reductase
[COG0526] Thiol-disulfide isomerase and thioredoxins |
|---|
| TIGRFAM ID | [TIGR00357] methionine-R-sulfoxide reductase
[TIGR00401] methionine-S-sulfoxide reductase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 8 |
|---|
| Fosmid unclonability p-value | 0.541227 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGCCACATA AAAAAAACCA TCATGACGCG AATAATCATA ATACTAATAG TCATGAAAAT
AAGAACGCTA ATGATTTAGC GACAGTCTCA CCGCATGCGG TGTCACATTG GTTAAAGAAT
ATCAGTGCGT TTGGTGTCAC GACGGTCTTG AGTGCCGGTA TATTGGTAGC GTGTGGACAG
ATGAGTAGTG CAGAGAATAA CGTCAGTAGT AGCACAAGCA AGCAAAATAG CGGGGTAAAA
AGCTCACGTG ATATGTTGCC ATCCGATATG CTCAAAACAA TGCAAGCATT GCCGCAGTTG
ACTAAAGGTT TGGGCAAAAA TGGCGCTGCT GTGATTGACC CTAATAAACC CACCTTGGTT
AAGTTTTGGG CGAGCTGGTG CCCATTATGC TTAGGGACTC TAGCAGAAAC TGAAGAATGG
CGCACGGATT CTAAATTTTC TGGTTTAAAT GTCGTCACTG TGGCAAGTCC CGGTCATCTG
AATGAAAAAG CCGATGGCGA ATTCAGCACT TGGTATGCTG GCGTGCAAGC CGATTACCCT
AAGCTTCCCG TATTGATTGA TGCCTCAGGT GAGCTGATTA ATACGCTTGG CGTACAGGTT
TATCCAAGCT GGGCAATACT CGATAAAAAC GGTAATTTGG TGCATTTGGT CAAAGGTAAT
ATGTCAGCAG AGCAAGCCTA TGCCCTTGCT GAGAATGCCA GTAATGATTT TGCTGAACTC
AAAGCTGGTA GTGCTAAGCC TGCAAATGTA CAAACATTAG ATAACAACAG TAAAATTGAG
ACTATTAAGC AAAATGATGG CGTTTATTAT AATGACAAAG GTAAGGCGAT TAATACCCGC
TCAATCTATC TAGCAGGTGG CTGTTTCTGG GGCGTAGAAG CCTATATGGA GCGAGTCGAC
GGTGTCGTAG ATGCTGTATC AGGTTATGCC AATGGCGACA CAGTCAACCC AAGCTATGAG
CAAGTAATCC GTGGTTCAGG GCATGCCGAA GCAGTCAAAG TCACTTATGA TGCTGATAAA
ACGGATCTTG ATACGATTTT AAAATACTAT TTCCGCGTGG TTGATCCAAC CAGCTTAAAC
AAGCAAGGTA ATGATCGCGG TGTACAGTAT CGTTCAGGCG TTTATTACAG GGACAAAGCA
GATAAAGCGG TAGTTGATGC TGCAATTAAG CGTGTACAAA GCCAATATAA GCAAAAGGTA
GTCGTTGAAA ACAAAATATT GGACAACTTT TACTTAGCTG AGATGTATCA TCAAGATTAT
CTAGCGAAAA ATCCGAATGG CTATTGCCAT GTTGATTTAA GCCTTGCTGA TGACAAGCCT
GAAGACACGG CACGTACTAA GCTTGCACCA GTAACTACTG TCGCTGAGAC GTTAGATCCT
AAGCGTTATG CTGGGTTTGA TAAAGGCGCG CTAAAAAATA CTTTGACCAA AGCGCAATAT
GATATTACTC AAGATGCAGG CACTGAGCGG GCGTTCAGTC ATGAATATGA TAACTTGTTT
GCACCCGGTG TCTATGTCGA TGTGGTCAGC GGTGAGCCTT TATTCTTATC AACCGATAAA
TATGCCTCAG GCTGCGGTTG GCCAAGTTTT ACCAAGCCAA TTGATAAGCA AGTGATTACT
CAGCATGACG ATACGGCATT TAATATGGTA CGTACTGAGA TTCGTTCACG AGTGGCGGAT
TCGCATCTGG GTCATGTGTT CCCTGATGGT CCAAAAGACC GTGGCGGTCT GCGTTATTGC
ATCAATGGCG GGGCATTGCA GTTTATCCCA GTCAGTGTGA TGCCTCAGTC AGGCTATGCG
CCATTGGTCA AACTGGTCAA ACCTGCGAAA CCTTAG
|
|---|
| Protein sequence | MPHKKNHHDA NNHNTNSHEN KNANDLATVS PHAVSHWLKN ISAFGVTTVL SAGILVACGQ
MSSAENNVSS STSKQNSGVK SSRDMLPSDM LKTMQALPQL TKGLGKNGAA VIDPNKPTLV
KFWASWCPLC LGTLAETEEW RTDSKFSGLN VVTVASPGHL NEKADGEFST WYAGVQADYP
KLPVLIDASG ELINTLGVQV YPSWAILDKN GNLVHLVKGN MSAEQAYALA ENASNDFAEL
KAGSAKPANV QTLDNNSKIE TIKQNDGVYY NDKGKAINTR SIYLAGGCFW GVEAYMERVD
GVVDAVSGYA NGDTVNPSYE QVIRGSGHAE AVKVTYDADK TDLDTILKYY FRVVDPTSLN
KQGNDRGVQY RSGVYYRDKA DKAVVDAAIK RVQSQYKQKV VVENKILDNF YLAEMYHQDY
LAKNPNGYCH VDLSLADDKP EDTARTKLAP VTTVAETLDP KRYAGFDKGA LKNTLTKAQY
DITQDAGTER AFSHEYDNLF APGVYVDVVS GEPLFLSTDK YASGCGWPSF TKPIDKQVIT
QHDDTAFNMV RTEIRSRVAD SHLGHVFPDG PKDRGGLRYC INGGALQFIP VSVMPQSGYA
PLVKLVKPAK P
|
|---|
| |