| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_1078 |
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| Symbol | |
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| ID | 4034687 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter cryohalolentis K5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007969 |
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| Strand | + |
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| Start bp | 1298836 |
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| End bp | 1299867 |
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| Gene Length | 1032 bp |
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| Protein Length | 343 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 637973543 |
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| Product | dihydrouridine synthase TIM-barrel protein nifR3 |
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| Protein accession | YP_580343 |
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| Protein GI | 93005906 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.165746 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.195756 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCTATTG ATTCTCCAGT TTTACCTTCG TCTAATCCTA CCTCAGACCA CCCTTTATTG
CAGCCACTCG TGATTGGCGG CTTGACGATT GAGAACCGTT TGATAGTTGC ACCGATGGCT
GGCGTGACAG ACAACCCTTT TCGCAGATTG TGCAAATCTT TTGGTGCAGG TCATGCAGTC
AGTGAAATGA TTATCGCTGA TACGGCATTG TATGCGCGCA AAAAATCGCT CTATCGTGCC
AATTTTGATA ATGAAATCGC GCCAATTTCG GCACAAATTG CTGGAGCTGA ACCTGATAAA
TTGGCAGAAG CGGCGCGTTA TCAGATTGAT AATGGTGCAC AAATTATTGA TATTAATATG
GGCTGCCCTG CCAAAAAAGT TTGCCGTAAA TTGGCAGGCT CTGCACTATT GCAAGATGAG
GATTTGGTTG CGCGCTTGCT AGATGCTGCG GTGAATGCCG TCGATGCGCC CGTTACTTTA
AAAACGCGCT TGGGCTATGA GAATGGCCGT GAAAATATTT TGCGTGTTGC AAAGCGAGCA
GAGCAAGCGG GTATAGCTGC TATTGCCATC CATGGGCGTA CGCGTGAAGA TATGTATACC
GGAGAGGCGC GCTATGAGCT GATTCGTGAA GTCAAAGAAA GCATCAGTAT TCCAGTAATT
GCCAATGGTG ATATCGATAG TGCGCAAAAA GCGCAGCGTG TTTATGAGCT GACCGGCTGC
GATGCGGTGA TGATTGGACG CGCTGCACAA GGACAACCAT GGATATTTCG CGATATCGAG
CATTTTTTGC GCACAGGTGA GACGCTGGCA TCACCCAGTG TTAGCGAGAT AAAAGGAATT
GTACTGACAC ATTTAGAAGA GCTATACGGT TTTTATGGTG AATACTCAGG CTGCCGTATT
GCTCGCAAGC ACATTGCTTG GTATACCACC GGTATTCCGA ACTCTAACGC CTTTAGGCAA
GCCATGTATG GTGAGGAAAG TACCGCCGGA CAGTTCCGTG TGGTAGAGGA TTTTTTGAAT
GCTCATGAAT AA
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| Protein sequence | MSIDSPVLPS SNPTSDHPLL QPLVIGGLTI ENRLIVAPMA GVTDNPFRRL CKSFGAGHAV
SEMIIADTAL YARKKSLYRA NFDNEIAPIS AQIAGAEPDK LAEAARYQID NGAQIIDINM
GCPAKKVCRK LAGSALLQDE DLVARLLDAA VNAVDAPVTL KTRLGYENGR ENILRVAKRA
EQAGIAAIAI HGRTREDMYT GEARYELIRE VKESISIPVI ANGDIDSAQK AQRVYELTGC
DAVMIGRAAQ GQPWIFRDIE HFLRTGETLA SPSVSEIKGI VLTHLEELYG FYGEYSGCRI
ARKHIAWYTT GIPNSNAFRQ AMYGEESTAG QFRVVEDFLN AHE
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