Gene Pcryo_1064 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_1064 
Symbol 
ID4035465 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp1280293 
End bp1281099 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content44% 
IMG OID637973529 
Product3-deoxy-manno-octulosonate cytidylyltransferase 
Protein accessionYP_580329 
Protein GI93005892 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1212] CMP-2-keto-3-deoxyoctulosonic acid synthetase 
TIGRFAM ID[TIGR00466] 3-deoxy-D-manno-octulosonate cytidylyltransferase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.235107 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.95241 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTCATCAG CCCTTATGCC CGTCAAAACT CATATCGTCA TTCCTGCACG TTTAAAAAGT 
ACGCGTTTAC CTAACAAGCC ATTATTAACC ATTCATGGCA AGCCTATGAT ACTTTGGGTG
GCTGAAAAAG CACGATTGGC GGATTTTGCC GATGATATGT GTATTGCAAC CGATGATGAA
TCGATTGCAA AAATTTGTCT AGATGCAGGT TTTGATGTGG TGATGACAAG CAGTGAACAT
GCTTCAGGCA CGGACCGTTT GGCTGAAGTG GCTGCCATCA AAGGCTGGGC TGCCCATGAT
ATAGTGGTTA ATATGCAAGG TGACGAACCA CTAGTGCCGC CATTGTTGTT AGAGCAAGTT
AAAACATTAT TGGTACAAGA TGCAGAGAGC GTCATGGCAA CTTTATGTGA GCCAATCGAG
GACTATGATA CTTTTATGCG CCCATCCGTC GTTAAAGTGG TCAGTCAGAC GTCCAATGAT
CAACAACGGG CGCTTTATTT TAGTCGCGCG CCGATTCCTT GTAATCGTGA TGTGGTATTA
ACCAGTGAGA ATAGTAAACA GCCGCCAAAA AATGCCTATC GTCATCTAGG CTTATATGCT
TATCGCGTCA GTTTGCTACA GCAATTTGTC CACTGCTCAC AAACGCCGCT TGAAATACTG
GAAAGCTTAG AGCAATTACG TGTGTTGGAA AATGGTGGAC ATATCGCCAT TGCTAAAGCC
GCCTGCTCAT TACCTGCAGG TGTCGATACG CAAGAAGATT TGGATCGTTT AAATGCCATG
AGTTTGACAG ATTTCCAAGA TTATTAA
 
Protein sequence
MSSALMPVKT HIVIPARLKS TRLPNKPLLT IHGKPMILWV AEKARLADFA DDMCIATDDE 
SIAKICLDAG FDVVMTSSEH ASGTDRLAEV AAIKGWAAHD IVVNMQGDEP LVPPLLLEQV
KTLLVQDAES VMATLCEPIE DYDTFMRPSV VKVVSQTSND QQRALYFSRA PIPCNRDVVL
TSENSKQPPK NAYRHLGLYA YRVSLLQQFV HCSQTPLEIL ESLEQLRVLE NGGHIAIAKA
ACSLPAGVDT QEDLDRLNAM SLTDFQDY