| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_1062 |
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| Symbol | |
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| ID | 4035463 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter cryohalolentis K5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007969 |
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| Strand | + |
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| Start bp | 1277327 |
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| End bp | 1279123 |
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| Gene Length | 1797 bp |
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| Protein Length | 598 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637973527 |
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| Product | Lipid A export ATP-binding/permease protein MsbA |
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| Protein accession | YP_580327 |
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| Protein GI | 93005890 |
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| COG category | [V] Defense mechanisms |
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| COG ID | [COG1132] ABC-type multidrug transport system, ATPase and permease components |
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| TIGRFAM ID | [TIGR02203] lipid A export permease/ATP-binding protein MsbA |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 9 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCCAAG CTTACCAACC TGACTCTACA AAAACTTCTG CTAAAACACC AGTAGCACCA
ACAGTGGCGA CGTTAAATCC GCCTAAACGC AAGACGCTCA TGCGTTTACT GGCTTATTTA
AAACCATACT GGTGGGCAAT ATTGCTCACT ATTATCGGTT TTGCTATTAA TGCCGCCACC
GAGATTTGGA TTGCTAAACT CTTGCAATAC ATCACCGATG CTATCAATCA GAACGATCAA
AGTAAGCAGG ATTTATTTCC GTTTATTATT GTGATGCTGT TCTTTGTGCG CGGTGTGGGT
AGCTTTTTAG GTAATTACTA TACGGCATTG GTGTCACGAA ATTTGGTCTA TGAGCTGCGC
GTAGAGGTGT TTAATAAGTT ACTGCGTTTG CCAAGCTCAT TCTATTTGGC CAATCCGGCA
GGGACGATTT CGTCTAAGCT TATTTTTGAT GTTGAGCAGG TGACCGCTGC CAGTACCGAC
TCAATGAAAA CGTTATTACG TGACGGTCTG ACCGTGGTTG CCTTGATGGG CTTTTTGCTT
TATAGCAACT GGCGTTTGAC GCTGATTTTA TTCGTTGTGC TGCCACCGAT TCTATGGCTT
ATCCGGGTTG CCTCAAAGCG TTATTTGAAG CTTTCCAAAG GTATTCAAGA AACGATGGGT
GATGTCAGTC ATATCACCAA TGAAGTCATC AATGGTTATC AGGTGGTCAA GAATTATGGT
GGACAAGTAT ACGAGTCTAA GCGCTTTGAT GTGACGTCTA AGAAAAACCT ACGCCAAGGC
ATGAAGGTTG TTGTGACCAA TAGTATCAAT ACCCCAGCGG TACAGTTATT GATGGCAATG
GCAATGGCAG TCGTGGTTTG GCTAGCGCTA CGCCCTGCGG TGATAGACGA TATCTCAGCA
GGTCAGTTTA TCTCTTATAT CGCAGCAGCA GGTCTCTTAA GTAAGCCAGT ACGCTCATTG
ACGGATGTCA ATCAACAGTT ACAGAGAGGG CTTGCAGCTG GTGAATCGAT ATTTGCTTTA
TTAGATGAGC CGGAAGAAGC AGATACTGGT GTGCTTAGTC CTACCTTGGC AGGTGAGATT
AAACTGGATA ATGTCAGCTT GGTTTATCCA GACTCAACCG TGGCACTACA CGACTTTAAT
TTGGATATAC GTGCAGGCGA GACAGTAGCG CTCGTTGGAC GTAGTGGCGC GGGTAAATCA
TCTTTAGTCA ATTTACTCAC ACGTACATTA ACCACTTCTT CAGGGCAGAT TACGCTAGAC
GGTATGCCCA TTGAAGACAT TAAGCTTGAA AGCTTACGTG CCCAGATTGC GATGGTCAAT
CAGCAAGTGG TACTGTTTAA TACCACTGTG TTTAATAATA TTGCTTATGG CAGTTTGGCT
CATAAAACTC CAGCTGAAGT TGAGCAAGCA GCAAAAGATG CTTTTGCTCA TGATTTTATT
ATGCAAATGC CAAATGGCTA TCAAAGTGAA ATCGGTGCTG AAGGTTTACA ACTCTCTGGC
GGTCAGCGTC AGCGTCTATC GATTGCACGT GCTCTGCTAA AAGATGCGCC AATTTTGATA
TTGGATGAAG CTACTAGTGC TTTAGATAAT GAGTCAGAAT ATTATATACA AAAAGCGCTC
GATAATATTA TGAAGAATCG CACAACATTG GTTATTGCGC ATCGATTGAC TACAATTGAG
TCCGCCGACC GTATTGCTGT ACTAGATGGT GGTCAGATTG TTGAGCTTGG TACCCATACT
CAGCTGATGC AATTGCATGG TCATTATGCG CAGATGTATG CGCGTGATTT TGAATAA
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| Protein sequence | MSQAYQPDST KTSAKTPVAP TVATLNPPKR KTLMRLLAYL KPYWWAILLT IIGFAINAAT
EIWIAKLLQY ITDAINQNDQ SKQDLFPFII VMLFFVRGVG SFLGNYYTAL VSRNLVYELR
VEVFNKLLRL PSSFYLANPA GTISSKLIFD VEQVTAASTD SMKTLLRDGL TVVALMGFLL
YSNWRLTLIL FVVLPPILWL IRVASKRYLK LSKGIQETMG DVSHITNEVI NGYQVVKNYG
GQVYESKRFD VTSKKNLRQG MKVVVTNSIN TPAVQLLMAM AMAVVVWLAL RPAVIDDISA
GQFISYIAAA GLLSKPVRSL TDVNQQLQRG LAAGESIFAL LDEPEEADTG VLSPTLAGEI
KLDNVSLVYP DSTVALHDFN LDIRAGETVA LVGRSGAGKS SLVNLLTRTL TTSSGQITLD
GMPIEDIKLE SLRAQIAMVN QQVVLFNTTV FNNIAYGSLA HKTPAEVEQA AKDAFAHDFI
MQMPNGYQSE IGAEGLQLSG GQRQRLSIAR ALLKDAPILI LDEATSALDN ESEYYIQKAL
DNIMKNRTTL VIAHRLTTIE SADRIAVLDG GQIVELGTHT QLMQLHGHYA QMYARDFE
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