Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_1047 |
Symbol | |
ID | 4033882 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | - |
Start bp | 1255388 |
End bp | 1257439 |
Gene Length | 2052 bp |
Protein Length | 683 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637973512 |
Product | hypothetical protein |
Protein accession | YP_580312 |
Protein GI | 93005875 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR01451] conserved repeat domain |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGAAATCAA GCACTTTTAA TTACAGCTTA TTAGCCATTG GCGTCGCTGC TATACTAGGT ATGAGCACGA CTGTTAATGC AGTAGAGACG TCTAAAACAT CAACGAGCGT AGAGATTACT AACAAAGCTA CCGCTAGCTA TAATGTGAGT GGTCAGGCTC AACCAGAAGT CGAATCTAAC ACAGTAAAAA TAACGGTAAC AGAGCAAACA TCATTCTCAT TGGTTCCTGC TGTCACTAAT ACTGGAAAAG AAGTAGCGCC TAATGGGTTT GTTCAGTTTA CGCATACTTT GACCAACACG GGTAACCGCA CTGATAACTA TGCTATCACG ACGCCAACAG CTCCTGCCGG TTATGATACG GCCAACTCTA CTGTCTCGTA TAAGATATAT AACGAGCTTA ATGTAGAAGA TACAACTCGT ACTACAGATA ATGCGCCCTA TGGTGCCTCT AGTGGCAGAG TTTTTCCTCT TGAAAAAGGG CATTATATTG TACTTGTTAT TAATGCCAAA ACCACTGGTA ACAAAGGTGG TGAAACCAAA CCACTAGAAA TCTCTGCGGT TAGTTCACTT TTAGGTACAG ATAAAACACT CATCAATACT GACACCTCTT TTACAAGGCT TCCTACCTTT AGTATCGTTA AGACGATTAT TAATGGCTTA GACCTCAATA ATCTTGATAA TGATACAGCT ACTTATAGAG TTGTAGTCAC CAACGATGGC AACACTGCAT TTACGGCTGA TGCTACTGAT ATTGCTATTG CAGATATTCT ACCAGATGGT CTGGTAATGG CAGAGGCACT AACACTAGCT AATATCAAAA CCAGTTCTAC TGCGACTAAA GGCACTATCG ATCCCATTAA TACGGGTGCT GTAGGTACTA GTGGCTTTAA CATTACTGGT ATCAATATCC CAGTAGGGCA AAACATAACT ATTGAATTTA AAGTCAAAAA AGGGACAGGC ACACTTACTC CTGCAACAGC TATCAATCAC GTGACAGTGA CTGATGACTT GGATAACAAT CCTAATACTG ATAATACGCT TATCGATAGT ACAGACACTA GTAGAGAACA AAATGTTGGT GCGTTCTATC CTACTACCGA GATTAATAAC CTCAACGGTC AGCGACCAGC TAACCCAGGT GATGACTCAA CACTGCCACT ATCCTCAGCA ACTATTCAGC GAGCTCTAAC ACTAACTGGT TCAACTTTCA GAGAGATTTC ACCGACTTCA GGTACTCTCG GTCAAGTGAA ACATCAAACG GTCATCACCA ACACTGGTAA AGACGTCGAG GGCATTAAAG CTGAGGAATT AACTTTTACT ATCAATGACA ATGACGGTAA CCTGCCAGAC CAAATTAATA TAGTTCCTAA TAGCGTCACT GTCACTTATT ATCCAAATGG CAACGACACC ACAACACCAA CAGTAGTGGA TAAAACTATT ACCGCGGTCG ATGGTGTCTA TGATCTCTTT TCTGCTTTAC CTAATGGTAT AGCCCCTAAT GGTACTGTCA CTATTAAATA TAACGTGTCA TCAGCCAATG CAAAAATATT TACACCAATA AACTCTACCA CTCCTACATT CGAAGAAACT GTGGTCACCT TGATTCCAGG TAAGGAAGGC GCGCCTCAAT CGGTTTCAGT CACCGATAGA ACAACTGTTC GCGGTTTAAC ATTGCTGAAA ACCCAAGCGA TAAATGCAGA TTGTGTGGGT ACACCTCCTG CTGCGAATTT TGTCAGTACT GACATTAAAG ACGTTTCGCC TGGCCAATGT ATTGTTTATA AGGTCCAAGC GAAAAATACT TCTTCTGCTG ATACGACCTC TCCTACAGGC ATAGGTTTTG ATATTAAAAA TATCGTTATC TCAGATGCAT TTTCTAACTT CTCAAATGAG GCTGACTATG TAGCGAATTC TGTAGAGACT ACTAATGGCA CAACATCTGA TACTGGAACT GCCATTACTA ATAATATTGA TATGTTAGCG CCTCAAGCAA CTGAAACCAT GCAATTTAAA GTAAAAGTCA AAACTGCTAG GGTAGTTACT CCTACGCCAT AA
|
Protein sequence | MKSSTFNYSL LAIGVAAILG MSTTVNAVET SKTSTSVEIT NKATASYNVS GQAQPEVESN TVKITVTEQT SFSLVPAVTN TGKEVAPNGF VQFTHTLTNT GNRTDNYAIT TPTAPAGYDT ANSTVSYKIY NELNVEDTTR TTDNAPYGAS SGRVFPLEKG HYIVLVINAK TTGNKGGETK PLEISAVSSL LGTDKTLINT DTSFTRLPTF SIVKTIINGL DLNNLDNDTA TYRVVVTNDG NTAFTADATD IAIADILPDG LVMAEALTLA NIKTSSTATK GTIDPINTGA VGTSGFNITG INIPVGQNIT IEFKVKKGTG TLTPATAINH VTVTDDLDNN PNTDNTLIDS TDTSREQNVG AFYPTTEINN LNGQRPANPG DDSTLPLSSA TIQRALTLTG STFREISPTS GTLGQVKHQT VITNTGKDVE GIKAEELTFT INDNDGNLPD QINIVPNSVT VTYYPNGNDT TTPTVVDKTI TAVDGVYDLF SALPNGIAPN GTVTIKYNVS SANAKIFTPI NSTTPTFEET VVTLIPGKEG APQSVSVTDR TTVRGLTLLK TQAINADCVG TPPAANFVST DIKDVSPGQC IVYKVQAKNT SSADTTSPTG IGFDIKNIVI SDAFSNFSNE ADYVANSVET TNGTTSDTGT AITNNIDMLA PQATETMQFK VKVKTARVVT PTP
|
| |