Gene Pcryo_1047 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_1047 
Symbol 
ID4033882 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp1255388 
End bp1257439 
Gene Length2052 bp 
Protein Length683 aa 
Translation table11 
GC content41% 
IMG OID637973512 
Producthypothetical protein 
Protein accessionYP_580312 
Protein GI93005875 
COG category 
COG ID 
TIGRFAM ID[TIGR01451] conserved repeat domain 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATCAA GCACTTTTAA TTACAGCTTA TTAGCCATTG GCGTCGCTGC TATACTAGGT 
ATGAGCACGA CTGTTAATGC AGTAGAGACG TCTAAAACAT CAACGAGCGT AGAGATTACT
AACAAAGCTA CCGCTAGCTA TAATGTGAGT GGTCAGGCTC AACCAGAAGT CGAATCTAAC
ACAGTAAAAA TAACGGTAAC AGAGCAAACA TCATTCTCAT TGGTTCCTGC TGTCACTAAT
ACTGGAAAAG AAGTAGCGCC TAATGGGTTT GTTCAGTTTA CGCATACTTT GACCAACACG
GGTAACCGCA CTGATAACTA TGCTATCACG ACGCCAACAG CTCCTGCCGG TTATGATACG
GCCAACTCTA CTGTCTCGTA TAAGATATAT AACGAGCTTA ATGTAGAAGA TACAACTCGT
ACTACAGATA ATGCGCCCTA TGGTGCCTCT AGTGGCAGAG TTTTTCCTCT TGAAAAAGGG
CATTATATTG TACTTGTTAT TAATGCCAAA ACCACTGGTA ACAAAGGTGG TGAAACCAAA
CCACTAGAAA TCTCTGCGGT TAGTTCACTT TTAGGTACAG ATAAAACACT CATCAATACT
GACACCTCTT TTACAAGGCT TCCTACCTTT AGTATCGTTA AGACGATTAT TAATGGCTTA
GACCTCAATA ATCTTGATAA TGATACAGCT ACTTATAGAG TTGTAGTCAC CAACGATGGC
AACACTGCAT TTACGGCTGA TGCTACTGAT ATTGCTATTG CAGATATTCT ACCAGATGGT
CTGGTAATGG CAGAGGCACT AACACTAGCT AATATCAAAA CCAGTTCTAC TGCGACTAAA
GGCACTATCG ATCCCATTAA TACGGGTGCT GTAGGTACTA GTGGCTTTAA CATTACTGGT
ATCAATATCC CAGTAGGGCA AAACATAACT ATTGAATTTA AAGTCAAAAA AGGGACAGGC
ACACTTACTC CTGCAACAGC TATCAATCAC GTGACAGTGA CTGATGACTT GGATAACAAT
CCTAATACTG ATAATACGCT TATCGATAGT ACAGACACTA GTAGAGAACA AAATGTTGGT
GCGTTCTATC CTACTACCGA GATTAATAAC CTCAACGGTC AGCGACCAGC TAACCCAGGT
GATGACTCAA CACTGCCACT ATCCTCAGCA ACTATTCAGC GAGCTCTAAC ACTAACTGGT
TCAACTTTCA GAGAGATTTC ACCGACTTCA GGTACTCTCG GTCAAGTGAA ACATCAAACG
GTCATCACCA ACACTGGTAA AGACGTCGAG GGCATTAAAG CTGAGGAATT AACTTTTACT
ATCAATGACA ATGACGGTAA CCTGCCAGAC CAAATTAATA TAGTTCCTAA TAGCGTCACT
GTCACTTATT ATCCAAATGG CAACGACACC ACAACACCAA CAGTAGTGGA TAAAACTATT
ACCGCGGTCG ATGGTGTCTA TGATCTCTTT TCTGCTTTAC CTAATGGTAT AGCCCCTAAT
GGTACTGTCA CTATTAAATA TAACGTGTCA TCAGCCAATG CAAAAATATT TACACCAATA
AACTCTACCA CTCCTACATT CGAAGAAACT GTGGTCACCT TGATTCCAGG TAAGGAAGGC
GCGCCTCAAT CGGTTTCAGT CACCGATAGA ACAACTGTTC GCGGTTTAAC ATTGCTGAAA
ACCCAAGCGA TAAATGCAGA TTGTGTGGGT ACACCTCCTG CTGCGAATTT TGTCAGTACT
GACATTAAAG ACGTTTCGCC TGGCCAATGT ATTGTTTATA AGGTCCAAGC GAAAAATACT
TCTTCTGCTG ATACGACCTC TCCTACAGGC ATAGGTTTTG ATATTAAAAA TATCGTTATC
TCAGATGCAT TTTCTAACTT CTCAAATGAG GCTGACTATG TAGCGAATTC TGTAGAGACT
ACTAATGGCA CAACATCTGA TACTGGAACT GCCATTACTA ATAATATTGA TATGTTAGCG
CCTCAAGCAA CTGAAACCAT GCAATTTAAA GTAAAAGTCA AAACTGCTAG GGTAGTTACT
CCTACGCCAT AA
 
Protein sequence
MKSSTFNYSL LAIGVAAILG MSTTVNAVET SKTSTSVEIT NKATASYNVS GQAQPEVESN 
TVKITVTEQT SFSLVPAVTN TGKEVAPNGF VQFTHTLTNT GNRTDNYAIT TPTAPAGYDT
ANSTVSYKIY NELNVEDTTR TTDNAPYGAS SGRVFPLEKG HYIVLVINAK TTGNKGGETK
PLEISAVSSL LGTDKTLINT DTSFTRLPTF SIVKTIINGL DLNNLDNDTA TYRVVVTNDG
NTAFTADATD IAIADILPDG LVMAEALTLA NIKTSSTATK GTIDPINTGA VGTSGFNITG
INIPVGQNIT IEFKVKKGTG TLTPATAINH VTVTDDLDNN PNTDNTLIDS TDTSREQNVG
AFYPTTEINN LNGQRPANPG DDSTLPLSSA TIQRALTLTG STFREISPTS GTLGQVKHQT
VITNTGKDVE GIKAEELTFT INDNDGNLPD QINIVPNSVT VTYYPNGNDT TTPTVVDKTI
TAVDGVYDLF SALPNGIAPN GTVTIKYNVS SANAKIFTPI NSTTPTFEET VVTLIPGKEG
APQSVSVTDR TTVRGLTLLK TQAINADCVG TPPAANFVST DIKDVSPGQC IVYKVQAKNT
SSADTTSPTG IGFDIKNIVI SDAFSNFSNE ADYVANSVET TNGTTSDTGT AITNNIDMLA
PQATETMQFK VKVKTARVVT PTP