| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_1008 |
|---|
| Symbol | |
|---|
| ID | 4033821 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter cryohalolentis K5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007969 |
|---|
| Strand | - |
|---|
| Start bp | 1206013 |
|---|
| End bp | 1207404 |
|---|
| Gene Length | 1392 bp |
|---|
| Protein Length | 463 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 637973473 |
|---|
| Product | secretion protein HlyD |
|---|
| Protein accession | YP_580273 |
|---|
| Protein GI | 93005836 |
|---|
| COG category | [V] Defense mechanisms |
|---|
| COG ID | [COG1566] Multidrug resistance efflux pump |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.387294 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 11 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAACGAAG ACAAACCGAA CCGCGTTGAT GACGCAAGCA CACCTAACAA AACAGCTAAA
ACTGTTGAAA ATGCTCAAGC TAGTGAATCA CTATCAAATC AAGCGGTTGT GGATACACCA
TCACAGTCAC ACATGGCTTC CAATAATGAC GCAAATACCA ATATAGCAGC CATTCAACCT
GAACCGACTA TGTCTGCAAC TCGGATTCAA ACCGACCCTT CTGATGACTT ACCTACGAAT
ACCAATGAGC CTATAAACGC CGCTGATACA AATAAAATAG ACAGCACTGA GGCAGGCGAT
GGCAAAGATG ATACACCGAT GCCACCCACT GAATCTATTC CTGCGCCAGC AGGTTGGTCG
CCCAAAAAGA AGTCATTTTT TAATTTAGCC TTACTGATTG CGCTGATTGT TATTGGTGTG
GCACTCATTC TCTATGCGTG GAAACTACCA CCTTTTACTC CAACCATGCA GCAAACCAAT
AATGCTTTTG TTAAAGGACA AACCACCATT ATCAGTCCGC AAGTGTCAGG TTATGTGACA
GAAGTAGCGG TAGAAGATTT TGCGAATGTT GTAGCTGGTG ACTTATTGGT AAAAATAGAT
GACCGTACTT TTCAGCAGCA GCTCGAACAA GCGCGGGCGA ATATCGATAT TGCGTTAACC
AATCGCTCTA GTAATGCGCA AGATACTGGC ACCAGCCAAG CACAGATTCA GGCACGTGAG
GCAGATGTTT ATAGCGCCAA AGTGAGTGTC GACAGTGCCC GAGAGGACGT CAACCGTTAT
CAGGGCTTGA TTGCCATTGG TGCAGTATCA AGTGCAGATG TTGCCCATGC TGAAGCTCAA
TTAGCAAAAG CACAAGCTGG TGTCCAACAA GCGGAAGCCA ATTTACAAGT GGCAGTCGAG
GGCAGCAAAA AAACGACGGC TAGCCGCTCT TCATTGGATG CCAATATCAA AAATGCTGAA
GCTGCCGCAA AACAAGCACA GATTAACTTG GACAACACCA TAATCCGTGC TCCTGAATCG
GGACAACTGA GTCAGTTGAG CGTTAAAACA GGACAATATG TCACTGCTGG TACGCAGCTT
ATGTATATCG TACCAAAAGG CGTATGGATT ATTGCCAACT TTAAAGAGAC GCAAGTGGCA
AATATGACCA TTGGTGAAGC GGCCACTATT CATGTGGATG CCTTAGGTGG TACACGGTTT
AGCGGACGGG TCAGCAATAT ATCACCCGCA ACAGGCAGTG AATTCAGTGC TGGCGCTGCC
AATCCTGCGA CAGGTAACTA TATTAAAATT GCTCAGCGTA TTCCGGTACG CATCGACTTA
GACTCTAACC AGCCAGACCT TGCCCGCCTA CGTCCTGGTA TGTCTGTTTC GGTAGATGTT
GATACCAAAT AG
|
|---|
| Protein sequence | MNEDKPNRVD DASTPNKTAK TVENAQASES LSNQAVVDTP SQSHMASNND ANTNIAAIQP
EPTMSATRIQ TDPSDDLPTN TNEPINAADT NKIDSTEAGD GKDDTPMPPT ESIPAPAGWS
PKKKSFFNLA LLIALIVIGV ALILYAWKLP PFTPTMQQTN NAFVKGQTTI ISPQVSGYVT
EVAVEDFANV VAGDLLVKID DRTFQQQLEQ ARANIDIALT NRSSNAQDTG TSQAQIQARE
ADVYSAKVSV DSAREDVNRY QGLIAIGAVS SADVAHAEAQ LAKAQAGVQQ AEANLQVAVE
GSKKTTASRS SLDANIKNAE AAAKQAQINL DNTIIRAPES GQLSQLSVKT GQYVTAGTQL
MYIVPKGVWI IANFKETQVA NMTIGEAATI HVDALGGTRF SGRVSNISPA TGSEFSAGAA
NPATGNYIKI AQRIPVRIDL DSNQPDLARL RPGMSVSVDV DTK
|
|---|
| |