Gene Pcryo_0990 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_0990 
Symbol 
ID4035735 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp1180019 
End bp1180717 
Gene Length699 bp 
Protein Length232 aa 
Translation table11 
GC content47% 
IMG OID637973454 
ProductABC transporter related 
Protein accessionYP_580255 
Protein GI93005818 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0410] ABC-type branched-chain amino acid transport systems, ATPase component 
TIGRFAM ID[TIGR03410] urea ABC transporter, ATP-binding protein UrtE 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGTTAGAAA TTAATGCCAT AAATCAATAT TATGGTGGCA GTCACATTTT ACGTGATGTC 
ACCCTCGCCG CCCCGGTAGG AGAATGTAGC GTGGTACTGG GTCGTAATGG CGTCGGTAAA
ACCACCTTGC TTAAATGCTT GATGGGCATC CTACCAATAA AATCAGGTGA AATTTTATTA
GACGGTAAGG ACATTAGTCA GATGACGCCT GAGCAGCGTG TACGCGCAGG ACTCGCTTAT
GTACCGCAAG GACGTGATAT CTTTTCCACT TTGACCGTTG AAGAAAACAT TCTGATTGGC
ATGGCGAAAT TTTCTCAACG AAAAGCAAGC AAAGTACCTA AACACTTGTA TGATATATTT
CCAGTGCTGG ACGAGATGAA GCATCGCCGC GGCGGCGATC TATCTGGCGG TCAGCAGCAG
CAGCTCGCTA TTGCTCGTGC GCTTGCCTCC GAGCCATCTG TGCTGGTACT CGATGAGCCG
ACTGAAGGTA TTCAGCCCTC TATCATCAAG GACATCGGGC GGGTCATTAG GGATTTGGGT
TATCAAGGTG AAATGGCAAT TATACTGGTC GAGCAGTTTT ATGAGTTTGC AGAAGAGCTT
GCCGATAACT ATACCGTGCT CTCTAGAGGA CAAGTAGTTG CTCAAGGGGC TGGAGTTGAC
ATGGCAAAAA ACAACATTCA AGAGTTGGTG GCAATCTAA
 
Protein sequence
MLEINAINQY YGGSHILRDV TLAAPVGECS VVLGRNGVGK TTLLKCLMGI LPIKSGEILL 
DGKDISQMTP EQRVRAGLAY VPQGRDIFST LTVEENILIG MAKFSQRKAS KVPKHLYDIF
PVLDEMKHRR GGDLSGGQQQ QLAIARALAS EPSVLVLDEP TEGIQPSIIK DIGRVIRDLG
YQGEMAIILV EQFYEFAEEL ADNYTVLSRG QVVAQGAGVD MAKNNIQELV AI