Gene Pcryo_0911 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_0911 
Symbol 
ID4035922 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp1077587 
End bp1078639 
Gene Length1053 bp 
Protein Length350 aa 
Translation table11 
GC content41% 
IMG OID637973374 
ProductTRAP dicarboxylate transporter- DctP subunit 
Protein accessionYP_580176 
Protein GI93005739 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG1638] TRAP-type C4-dicarboxylate transport system, periplasmic component 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones12 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones10 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTAG CACCTTTTTT TTCGATAGGT GCACTAGCAG CTATTAGCCT TTTTGGTTGT 
TCTGGCCAAT CTGATAACAG TAGCGAAGTT GCCTCAAATC AAGAAGTTAC CGTTCTACGT
TTCTCCCATT TTTATCCCGC CACTGCTGAT GTTAATAAAG AAATCTTTGA GCCATGGGCC
AAAAAAATTG GAGAAGATTC TAATGGTCGT CTTAAGGTTG AGGTATATCC ATCGGCAACA
CTCAGTAAAG CAGATACCGC TTATGAATCC ACAGTAAAGG GAACGATTGA CATCGGTTCT
CAAGTACAGG GTTATACTAG TGGTCGCTTT CCACTGACCC AGATTGCAGA GCTTCCCGGT
TTGTCTAATT CATCAACACA GACAGGTTGT ATGCTGCAAA CCCTTTATGA AAATGGCACT
ATATCTAGCG AATATGAAGA TTCACATCTC CTTTTTATGT TCGCTACCGG CCCTGGTACA
TTACATAGTG CTGATAAGCT TATTCGAACT CCCGAAGATA TGAAAGGGAT GCGTATCCGC
AGGCCATCTG CTGTAGCAGG TGATATTATC GAAAGTATGG GTGCCTCTCC TGTGGGTTTA
CCTGCCAATG ATATATATAC GTCTCTACAG CGCGGTGTGG TTGATGGATT GAGCTTTCCA
TGGGAGGCGA TCACAACTTT CAAGCTTGAT GAGTTAACCA AATATCATAC CAATATCCCA
TTTTATAGTT CTGCTCTGAT GATGACTATG AATAAAGATA AATATGAAAG TTTGCCTGAT
GATTTAAAAA AGGTCATTGA TGATAACTCA GGTATGGCTC TTACTAAGAA AGTTGGTGAG
ATGTGGGATA GAACTGATTT ATTAGGTTTG CAAGCTGCTA AAGATAGAGG TGATGAGATC
ATTGATATTT CAGATCCACT TAATGATCCA GATTGGAAAG GACCTCTGCT AAAAGGAACA
CAAAAATACT TAGACGATGT AAGCGCATTA GGACTCGATG CTGAAAGTGT CTATGAAAAA
GCAAAAGCTG CTAGTGTGGC CTGTAAGGTT TAA
 
Protein sequence
MKLAPFFSIG ALAAISLFGC SGQSDNSSEV ASNQEVTVLR FSHFYPATAD VNKEIFEPWA 
KKIGEDSNGR LKVEVYPSAT LSKADTAYES TVKGTIDIGS QVQGYTSGRF PLTQIAELPG
LSNSSTQTGC MLQTLYENGT ISSEYEDSHL LFMFATGPGT LHSADKLIRT PEDMKGMRIR
RPSAVAGDII ESMGASPVGL PANDIYTSLQ RGVVDGLSFP WEAITTFKLD ELTKYHTNIP
FYSSALMMTM NKDKYESLPD DLKKVIDDNS GMALTKKVGE MWDRTDLLGL QAAKDRGDEI
IDISDPLNDP DWKGPLLKGT QKYLDDVSAL GLDAESVYEK AKAASVACKV