Gene Pcryo_0896 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_0896 
Symbol 
ID4034035 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp1061168 
End bp1062637 
Gene Length1470 bp 
Protein Length489 aa 
Translation table11 
GC content46% 
IMG OID637973359 
ProductNa+/H+ antiporter NhaC 
Protein accessionYP_580161 
Protein GI93005724 
COG category[C] Energy production and conversion 
COG ID[COG1757] Na+/H+ antiporter 
TIGRFAM ID[TIGR00931] Na+/H+ antiporter NhaC 


Plasmid Coverage information

Num covering plasmid clones15 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATTGCAG ATAAACCTCA CAAACCGCAT GACCCTGATA TCGAAGGTTA TGATCCTTCT 
TCTAGCTTCC TGCTAGATAT TGCCCCACTG ATACTGACTG CCATTATTCT AATGGTGCAA
TTTTTTGTCT TTAAAGATTT TACTCCGCAT ATTCCGCTAG CATGTGGCAT CTTGATCACC
GGTCTGTTTA TGAAGATACG TGGTCGCAGC TGGGATGGTA TGGAAGAGCG TTTTTTAAAG
GTTGTGAAAA TTGGTCTGCC TGCCATGATC ATCTTGATGG GTGTAGGGAT GCTCATCGGT
GCTTGGATTA TCGCCGGCAC TGTACCCACT ATTTTATACT ACGGCTTTAG TGTTTTTTCT
CCCTCCTCAT TTCTAGTCTC TGTTTGTCTT ATTTGTGCCA TTATTTCAGT AGCAACGGGT
ACCTCTTGGG GCACGGTTGG CACAGTCGGT TTAGCTATGA TGGGTATTGG TTTGGGGTTA
GGTATTCCAC CGTCACTAAC AGGTGGTGCC ATCGTCTCTG GTGCTTTTTT TGGCGACAAA
ATGTCTCCGT TGTCTGACAC CACGAACTTA ACACCAGCTG CTGCCGGTGT TGACCTCTGG
GACCATATCC GTGGCATGTT GCCGACGACT GTACCTGCCA TGGTGACTGC TCTGATTCTC
TATGCTTGGA TTGGTATGAG CTACGGCGCA GACAATGTCG ATCTCACCTC AATCAAAGAA
ATACAAACCT CATTAGCAGC GAACTATAAC CTGAGCATTA TTACTTTATT ACCTGCTGTT
GTCGTCGTCA TTGCAGCTGT TATGAAAATG CCAGCCATTC CAACGGTATT GTCAGGTGTG
GTAGTCGCAG GTCTTGTCGC ATTCTTTATG CAAGGCGTCG GTGTCCATGA CATCTTTAAC
GTCCTACAAA ACGGTTTTAA AAGTGAGACC GGCTTTGCTG TGGTCGATCA ACTGTTGTCT
AAAGGTGGCG TGATGTCCAT GACTTGGGTC GTGACCTTAA CTATCTTTGC ACTAGCTTTT
GTCGGTTCAA TTGAGCATTA CGGTACATTA AAAGCCATCA TGGCCAAAAT CAACAACATG
GTGAAATCGA GATTTGGTTT AGTGATTACG ACTTATGCCA GTACCATCGG TGTTGGTACG
CTTATCGGTG ATGTCTATAC CACGCTAGTC TTACCGGGTC GTCTGCTCAA AGATAAGTAT
AAAGAGATGG GTTACAAGCG CACGACGCTT ACTCGCTCTA TCGAAGATAC GGGTACGCTG
TTATCGCCAC TTATTCCTTG GAATATGGGC GGTAGCTTTG TCGCGGCAAC CCTAGGTATT
GCGACCTTAA CTTACGCTCC ATTCGCCTTT GCCTGCTGGT TATCACCATT GTTTGGCTTG
CTATGGGTCG TCTTAAATAA ATTTATTCCT CGTGAAAAAC CGACTGTCAT CGATAACACA
AGCACGCTCT CTACCGTAGA AAACGTATAA
 
Protein sequence
MIADKPHKPH DPDIEGYDPS SSFLLDIAPL ILTAIILMVQ FFVFKDFTPH IPLACGILIT 
GLFMKIRGRS WDGMEERFLK VVKIGLPAMI ILMGVGMLIG AWIIAGTVPT ILYYGFSVFS
PSSFLVSVCL ICAIISVATG TSWGTVGTVG LAMMGIGLGL GIPPSLTGGA IVSGAFFGDK
MSPLSDTTNL TPAAAGVDLW DHIRGMLPTT VPAMVTALIL YAWIGMSYGA DNVDLTSIKE
IQTSLAANYN LSIITLLPAV VVVIAAVMKM PAIPTVLSGV VVAGLVAFFM QGVGVHDIFN
VLQNGFKSET GFAVVDQLLS KGGVMSMTWV VTLTIFALAF VGSIEHYGTL KAIMAKINNM
VKSRFGLVIT TYASTIGVGT LIGDVYTTLV LPGRLLKDKY KEMGYKRTTL TRSIEDTGTL
LSPLIPWNMG GSFVAATLGI ATLTYAPFAF ACWLSPLFGL LWVVLNKFIP REKPTVIDNT
STLSTVENV