| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_0877 |
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| Symbol | |
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| ID | 4035313 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter cryohalolentis K5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007969 |
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| Strand | - |
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| Start bp | 1039006 |
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| End bp | 1040892 |
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| Gene Length | 1887 bp |
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| Protein Length | 628 aa |
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| Translation table | 11 |
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| GC content | 44% |
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| IMG OID | 637973340 |
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| Product | Outer membrane autotransporter barrel |
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| Protein accession | YP_580142 |
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| Protein GI | 93005705 |
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| COG category | [I] Lipid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG3240] Phospholipase/lecithinase/hemolysin |
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| TIGRFAM ID | [TIGR01414] outer membrane autotransporter barrel domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCTCGTA ATATCTCTCA CGCTATTGTT AACCCTACCA CCCTTAAAAC ATTGACCAAA
AGTATGCTTG CCATCTCGCT ATCAATGGCA GGTCTAGCGC ATGCTGAGCT TTATAGCAGC
GTGACATTTT TCGGCGATAG CTTGACTGAT GGCGGTTATT TTAGTCCCAT TACCCAAGGC
AAGCTCGGTA TTAAAGAGTC AGGTCAATTT ACAACCAATC CTGATAACGT ATGGGCAACG
TCATTCGCTG AGCAGCTAGG TACAACAGCT GTTCCCATCG TTTATCTTGG AAATCAAGCT
GGTAATAACT ATGCTATTGG TGGTGCAAGA GCAGGCAAGG ATATCGTTAA TACGGACTTT
GGCGTTAACG TTCCTGTTGC GTCTGTGAAC ACTCAAGTTA ATGGTTATCT GGCTAATAAA
AAAGTTGATT CTAATGGTAT GTATGTGGTG TGGGGAGGCG CAAACGATTT ACTTGCGGCA
GCTGCAAATC CTGCTAATGC GATAAATACG ATTTCATCAG CAGCTGGCAG CCAAGTCGCC
GCTATTAAAG CGCTAAAAGA TAATGGTGCC AACTATATTT TAGTACCTAA TATCCCTGAT
ATAGGTCTAA CACCTACTGC TATCGCTGCA GGAGCAGGGT TTCAATCGTC TGGTACGATG
TTAGCAAATT TATATAACCA AACTATGTAT AGTGGCGCAG TAGCTACTGG CGCAAATATC
ATACCGCTCG ATACTTTTAG CTTATTACAA CAAGTCGCTG CCAATCCTAA AGCTTACGGC
TTTACTAATA TGACTCAAAA AGCGTGCAAC ACTTCAAGCT CGCTTTTATG TGGATCAAGT
AATTTAGTCG TGCCAGATGC CAATGAAAGC TATTTCTTTG CTGATGGCAT CCACCCATCA
GGACGCGCGC ACCAGATGAT TGCTGACTAT GCTAGTGCCG TCGTTACCGC TCCTAGTCTT
ATTGGCGTGT TACCGCACAT TGCGACGACA GCAGGGCTAG CAACTAGTGA GCGCTTACAA
TCTCACATCA ATCAAATCCA AAGTAGTGAA CAAAAACCTG CCCGTAAGTT ATGGGCAACC
GGTGATTTTG AAAATCAAGA TATTGCAGGG TTTGAAGGCG ATAGTAATAC CCAAGTATTA
TTAGGTGTAG ATTTTGCTCA TCCTAACTCA GCACATGCGG TAACAGGCTT GTATGGCAAT
ATCACTCAAA AGGATTTTGA GAATTCCGGG GTTCGCACTG GCTTAAGCAA TATCGACTTA
GAAGAAGTAG GCTTTGGTGT TTATCATAGC AATACGCTAG ATAAGCTTGG CGGCGTGCAG
CTTAATGGTG CGGTTGGCTT TGGTAATCTA GATGTTGATG TCACACGTGC GGTCACACTT
GGTGGCAATA AACAAGAGTT TAACTCTAAT GCTGATGGCA AACGTTACTA TGCTAACTTG
CAGGCAGGAT ATCCGATGCA GCTCAGCAGC CTTGCTATCA CGCCATATAT CGGTGCAACG
GCTAGCCGTG TGAGATTGGA CGCGCTAAAA GAGCAAGAAA TGTCTGGTAT CGCCATGCAG
TTTGATGAGC AAAAATATAC TACCACGTAT GGCAAGCTTG GCGTGAAAGC CAACCATAAC
CTAGCCGATT CACTTAATGT ATTCGGTGAT GTTCATTATC AAAAGCAGTT GAGTGACAAT
CGTGAAGCGG CTTCTGCGCG TCTTAACACC ATAGCAAATA TCAGCTTTGA TACGCCAATG
GTACAGACCG ACGATGATAA TTTTGGCATG ACGCTTGGTG TATCCAAAAG CTTTGGTCAA
TTAAATGCCA ATGCTGGTGT TACGCACTCG CAAGGTGATG ATGACAAATC AACGAGTTTG
TTTGTCGGTC TTAGCAGCAC TTACTAA
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| Protein sequence | MPRNISHAIV NPTTLKTLTK SMLAISLSMA GLAHAELYSS VTFFGDSLTD GGYFSPITQG
KLGIKESGQF TTNPDNVWAT SFAEQLGTTA VPIVYLGNQA GNNYAIGGAR AGKDIVNTDF
GVNVPVASVN TQVNGYLANK KVDSNGMYVV WGGANDLLAA AANPANAINT ISSAAGSQVA
AIKALKDNGA NYILVPNIPD IGLTPTAIAA GAGFQSSGTM LANLYNQTMY SGAVATGANI
IPLDTFSLLQ QVAANPKAYG FTNMTQKACN TSSSLLCGSS NLVVPDANES YFFADGIHPS
GRAHQMIADY ASAVVTAPSL IGVLPHIATT AGLATSERLQ SHINQIQSSE QKPARKLWAT
GDFENQDIAG FEGDSNTQVL LGVDFAHPNS AHAVTGLYGN ITQKDFENSG VRTGLSNIDL
EEVGFGVYHS NTLDKLGGVQ LNGAVGFGNL DVDVTRAVTL GGNKQEFNSN ADGKRYYANL
QAGYPMQLSS LAITPYIGAT ASRVRLDALK EQEMSGIAMQ FDEQKYTTTY GKLGVKANHN
LADSLNVFGD VHYQKQLSDN REAASARLNT IANISFDTPM VQTDDDNFGM TLGVSKSFGQ
LNANAGVTHS QGDDDKSTSL FVGLSSTY
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