Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_0855 |
Symbol | |
ID | 4035176 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | - |
Start bp | 1011925 |
End bp | 1013523 |
Gene Length | 1599 bp |
Protein Length | 532 aa |
Translation table | 11 |
GC content | 45% |
IMG OID | 637973318 |
Product | DNA polymerase III, epsilon subunit |
Protein accession | YP_580120 |
Protein GI | 93005683 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0328] Ribonuclease HI [COG0847] DNA polymerase III, epsilon subunit and related 3'-5' exonucleases |
TIGRFAM ID | [TIGR00573] exonuclease, DNA polymerase III, epsilon subunit family [TIGR01406] DNA polymerase III, epsilon subunit, Proteobacterial |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGTCAGAAA ATCGCAGCGC AGCGCAGCCA TTTAACACCA GTAATGCCAT AAACCCATTG GCTGCCAAAG CAGATACTAC GGTTGCTTAC ACAGATGGCG CGTGTAAAGG CAATCCTGGT GCTGGTGGCT GGGGCGCTCA TCTGATATTT AGCGACGGAC GGACGCAGGA TTTTTATGGC GGTGATAAAG AAACCACCAA TAATCGTATG GAATTGATGG GTGCGATACA AGCGCTTACT CATAGCTCAC ATGAGCAGAA ACTCGAGATT TGGACAGACT CAAGTTATGT CAAAAAAGGC ATCACTGAGT GGATTGAAGG TTGGAAAAAA AGAGGCTGGA AGACGGCCAG TAAAAAACCC GTCGCCAATC AAGACCTATG GCAGCGACTC GATGAGCTCT GTCAGAAACG CGATGTTGAT TGGCATTGGG TCAAAGGTCA TGCTGGACAT GCTGGTAATG AAAAAGCGGA TGAGCTTGCG AACCTAGGTG TGACCTCACG TAGTGAAGAT TTGATAACAG ACGTTCAAGA TAGTACTAAA AAAAAAGAGC CAATAATGGC TGATAAAAAG CCATCAAGCA GCGATGATTG GCTAAATTTT GATCCATTAG GTTTTGATAT GATGGATGAT GAGCTTGATG CCGAACTACT AGAGAATCAA AGTTATAATG ACAGTGTAAT AAATACTCAT GCTTTCGCTG AAGAAAATAT TAGTCCGTAC AATGCCACCA ATTCAATGAG TGCTATAGAA ATGCCAGACG CCCAGACGCC TTTGATTGAT ACAAGCATCA ATAACCATGC GTCCAACATG GTTACTAATG TTGAAGCAGA TACGCCAAAA TTCGATGGTG ACACCAGCCG TGCCAATCCA TATTTTAAGC CATTGCTACC CAAGCCAATA AACTGTCACC AATCTGATCG TCAGCTGATT ATGGATACCG AGACCACGGG GCTGGATCCG CAAAAAGGCG ATCGTGTCAT TGAAGTCGGT ATTGTAGAGA TGATTGGACG TAAGTTCACT GGCGAAAAGC TCCACGTCTA TATCAACCCA CAGCGCGGTA TGGATGAAGA AGTTATTCGA ATTCACGGTA TTTCTGAAGC ATTTTTAACG GACAAACCAA CCTTTGATCA AGTCGCGCAG TCGCTCTATG ACTTTATGGA TGGTGCAGAA ATCATCGCTC ATAATGCCTC GTTTGATATG AACTTCTTAA ATATGGAGTT TGCCAAAGTT GGCATGCATG ACTTTGCTGA GCGAGTAAAA GTGACCGACT CGCTGGTCAT GGCAAAGCAG CAGTATCCTG GACAGAAAAA TACTCTTGAT GCTCTCGTAC GTCGTTTAGA CGTGGGCAAG CAAGACCGTA CCTTTCACGG GGCATTACTA GATTCAGAGA TTTTAGCAGA AGTCTATTTG GCGATGACTG GCGGACAAGT AACGCTAGGC ATTGAGGATG ACGCGCAAGC GGATGGCGGA CACACAGCCC ATGCTAGCTT TGCCAATTTA GCGGCTTTAT TGCTTGAGTC AAGTACTGAT GAGGGCGCCA ATCAAAGCTG GTATGCGTCG CTCGCAGAAG ATTATCCTGA GCTGAAAGCC AAAATGTAA
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Protein sequence | MSENRSAAQP FNTSNAINPL AAKADTTVAY TDGACKGNPG AGGWGAHLIF SDGRTQDFYG GDKETTNNRM ELMGAIQALT HSSHEQKLEI WTDSSYVKKG ITEWIEGWKK RGWKTASKKP VANQDLWQRL DELCQKRDVD WHWVKGHAGH AGNEKADELA NLGVTSRSED LITDVQDSTK KKEPIMADKK PSSSDDWLNF DPLGFDMMDD ELDAELLENQ SYNDSVINTH AFAEENISPY NATNSMSAIE MPDAQTPLID TSINNHASNM VTNVEADTPK FDGDTSRANP YFKPLLPKPI NCHQSDRQLI MDTETTGLDP QKGDRVIEVG IVEMIGRKFT GEKLHVYINP QRGMDEEVIR IHGISEAFLT DKPTFDQVAQ SLYDFMDGAE IIAHNASFDM NFLNMEFAKV GMHDFAERVK VTDSLVMAKQ QYPGQKNTLD ALVRRLDVGK QDRTFHGALL DSEILAEVYL AMTGGQVTLG IEDDAQADGG HTAHASFANL AALLLESSTD EGANQSWYAS LAEDYPELKA KM
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