Gene Pcryo_0842 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_0842 
Symbol 
ID4035164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp997731 
End bp998978 
Gene Length1248 bp 
Protein Length415 aa 
Translation table11 
GC content43% 
IMG OID637973307 
Productglucose sorbosone dehydrogenase 
Protein accessionYP_580109 
Protein GI93005672 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG2133] Glucose/sorbosone dehydrogenases 
TIGRFAM ID[TIGR01643] YD repeat (two copies) 


Plasmid Coverage information

Num covering plasmid clones11 
Plasmid unclonability p-value0.973222 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones19 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATAATAA TAAATAGGCA GTATATGAGT AAACCATTAA CGTTACCGAT AATTATCACA 
GCATTACTGT TTAGTACTTC TGCTTGTTCA AATCAATCTG CCACTGATAC CAATGCCGAT
TTGGCAAAAT ATCAAGAAGC TGAAACCTCA GTAGCAGATG TTGCAAGTAC GGACAAACCT
GCCTTTACCA CAAAAGCCGT TGCCACCTTT GATGAGCCAT GGGCAATGAC TGCATTACCT
ATCGTTAGTA ATAAACCATC AAAACTGCTT GTCACACAAA AGACAGGCGA ATTATTCATT
GTTGATACGG CAACAGGTAC TAAGACAGAA ATCGCTAGCG TGCCTAAAGT CGCTTACGGG
GGACAAGGCG GTCTTGGTGA TATTATTCTT GCACCAGATT TTGTTACCTC TAACAACGTA
TATATCAGCT ACGTTGAGGC AGGCACTGGT GATGATAGTA ATAAATTTGG TGCAAAAGTC
ATTAAAGCCA AACTATCAGG TTTGGATACT GATCAACCAA GTTTGCAGAA GATGGTCCCA
ATTTGGCAGC AGACGCCAAA GGTAGATGGG CAAGGGCATT ACAGCCACCG TTTATTATTT
TCACCTGATG GGCAATATTT ATATATCAGC TCAGGCGAAC GTCAAGAAAA ACCTCCTGCT
CAAGACATGA CTGTCAATTT GGGAAAAATA ATACGGTTAA ATACTGACGG CTCGATGCCA
ATGGACAATC CATTTGTGAG TAATAATGAC ATCGCTGCTC AATTTTGGAG CATAGGACAT
CGTAATGTAC TCGGGATGGC ATTCGATAGT AAAGAGCAGT TGTGGGCGCA TGAAATGGGT
CCACGAGGTG GTGATGAGTT CAATCTGATT GAAAAAGGTA AGAATTACGG CTGGCCAATC
GTATCAAATG GTCGCAATTA TTCTGGTGTG GATATTCCTG ATCACAGTAC GCGTCCTGAG
CTTGAAGCAC CCAAAATCAC ATGGACACCA GTCATATCCC CTTCATCAAT AAGTATGTAT
TCGACTGGTA AGCACAATGA TTTTCCGGCG TGGCAAGGTA ATGCGCTGAT CAGTGGTTTA
TCCTCCAAAG CGCTGATAGT TGTTAATTTC GATGAAAATA ATGGTGCGAC TGAGCGCTAT
CGCTATGATA TGGGCGAGCG TATTCGTAGT GTACTGGTTG CAGATGGGCA GGTTTGGGCG
CTTGAAGATG GTAATGGTGG GCGATTACTG AGACTATCGC CTAAGTAG
 
Protein sequence
MIIINRQYMS KPLTLPIIIT ALLFSTSACS NQSATDTNAD LAKYQEAETS VADVASTDKP 
AFTTKAVATF DEPWAMTALP IVSNKPSKLL VTQKTGELFI VDTATGTKTE IASVPKVAYG
GQGGLGDIIL APDFVTSNNV YISYVEAGTG DDSNKFGAKV IKAKLSGLDT DQPSLQKMVP
IWQQTPKVDG QGHYSHRLLF SPDGQYLYIS SGERQEKPPA QDMTVNLGKI IRLNTDGSMP
MDNPFVSNND IAAQFWSIGH RNVLGMAFDS KEQLWAHEMG PRGGDEFNLI EKGKNYGWPI
VSNGRNYSGV DIPDHSTRPE LEAPKITWTP VISPSSISMY STGKHNDFPA WQGNALISGL
SSKALIVVNF DENNGATERY RYDMGERIRS VLVADGQVWA LEDGNGGRLL RLSPK