Gene Pcryo_0839 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_0839 
Symbol 
ID4033863 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp993004 
End bp993795 
Gene Length792 bp 
Protein Length263 aa 
Translation table11 
GC content49% 
IMG OID637973304 
Productshort-chain dehydrogenase/reductase SDR 
Protein accessionYP_580106 
Protein GI93005669 
COG category[I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism
[R] General function prediction only 
COG ID[COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones21 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAAATTG AACAACACAG CTTTTTGGTC ACGGGCGGTG CGTCAGGTCT GGGTGAGTCG 
GTAGTGCGTG CTATCGTGGC TCAAGGCGGC AAGGTTGTCA TCGCTGATCT TAATGAGTCG
ATGGGGCAAG CACTGGTTGA TGAATTGGGT GACCATGCTC GTTTTGTACG CTGTGATGTG
ACCAGTGGCG ATGAGGTACA AGCGGCTGTG GATATGGCTG AAAAAGAATT TGGCGGCTTA
CAAGGTTCTA TCAACTGTGC AGGTATTGCC GTTGTGCAAA AGCTGCTGGA CCGTGATAAT
AACCCAGCAA ATCTCGATGC TTTTAGTCGC GGCGTCAATA TTAATCTTGT TGGTTCCTTT
AATGTCGCGC GTTTGGTCGC AGCGAGTATT GCGAAGCGTG TAGCCAATGC CAATAACGCA
GACAGCTCCG TAGAGAAGAA CGCTGATAAT GGCGTCATTA TTAATACGGC TTCTATCGCG
GCTTTTGATG GGCAAGTAGG GCAAGCAAGC TATTCATCGT CTAAAGCTGG CGTCGTTGGT
CTGACCTTGC CGCTAGCGCG TGAGCTGGCG CGTCATGGTA TTCGCGTTAT GACCATCGCA
CCTGGTGTTT TTGCCACACC GATGATGGAT ACTATCCCTG AAAAAGCGCG CGAACAGCTA
GAGGCCGGTG TTCCTTATCC AAAGCGTTTA GGCAATCCAA ATGAGTTTGC TAAATTGGTC
ACGCACATTA TTGATAATGC CTACCTAAAT GGTGAAGTGA TTCGCCTAGA TGGCGCAATT
CGTATGGTGT AA
 
Protein sequence
MQIEQHSFLV TGGASGLGES VVRAIVAQGG KVVIADLNES MGQALVDELG DHARFVRCDV 
TSGDEVQAAV DMAEKEFGGL QGSINCAGIA VVQKLLDRDN NPANLDAFSR GVNINLVGSF
NVARLVAASI AKRVANANNA DSSVEKNADN GVIINTASIA AFDGQVGQAS YSSSKAGVVG
LTLPLARELA RHGIRVMTIA PGVFATPMMD TIPEKAREQL EAGVPYPKRL GNPNEFAKLV
THIIDNAYLN GEVIRLDGAI RMV