Gene Pcryo_0838 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_0838 
Symbol 
ID4033862 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp991195 
End bp992916 
Gene Length1722 bp 
Protein Length573 aa 
Translation table11 
GC content45% 
IMG OID637973303 
ProductAMP-dependent synthetase and ligase 
Protein accessionYP_580105 
Protein GI93005668 
COG category[I] Lipid transport and metabolism 
COG ID[COG0365] Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAATACCT CTCCTTCAAG TACTACCTCT TTAAACACCC CTTCAAATCA TGCTGTAAAT 
ACCTCACAGG CGCTAACGAG TTATAGTGAC TATTATAATA ATTTTGATAT GAACGCATTA
CTGACAGAGA TATTTGGTGA AAATGTAGAT GATCGTTTAA ACGCCTATAT GGCGTGCTGT
GGACGTCATG TACGTGACGG TCGCGGTGAT AATATTGCGC TAGTTCATGA AGATACGGCT
GGCAATGTCA CGCGTATGAG CTTTGCTGAG CTTGATAAAG CAAGTGCACA GGTTGCCAGT
TTACTACTTT CTTATGGCGT GCAAGCGGGT GACCAAGTGG CAACTATGCT ACCGCGTACC
CCTGAGTTAC TCACCATTGT ATTAGCCACT TGGCGGATTG GCGCAGTCTA TCAACCGCTG
TTTACCGCCT TTGGTTATGA TTCGATTAAG TATCGAATGG ACAAAGCTAA TACTAAAGTT
GTTTTTACCA ATCAAGACAA TCGTGGCAAG TTTGACGACT TGGCGAAGCA AACCAAAATG
GTGTTGGTTG GTAGCAAGGT AGATGCGCAA AGCTGGGGTG ATGATAACTA TGCTGACAAG
ATATCAAAGC AGCCACAAAC TATAGAATCA GTGTTACTAA ATACCGATGC ACCATTTTTA
CAGATGTTTA CCTCGGGTAC GGTTGGTAAG TCAAAAGGCG TTAGTGTGCC ACTAAGCGCA
CTTTCGGCTT TTTATCTGTA CATGCGTTAT GCAATTGACC TGCGCGCGGA TGACAACTAC
TGGAATATGG CAGATCCAGG CTGGGCGTAT GGGTTATATT ATGCGATTAC TGGGCCATTA
TTATTAGGTA TTACTACCTA TTTTAATGAA GCGGGCTTCG ATGCTGCCAA TACCCGCGAC
TTTATGGTAC GCCATAAAAT TAGCAATTTG GCGTCTTCAC CGACTGCATT TCGTATGATG
AAATCGAGTG GCGTATTTGA AGCTGCTCAC AATGACGCAG CGGCTAAATT ATCACTGCGC
TGTGCCAATT CAGCAGGCGA GACCTTAAAT ACCGAAGTGG TCAATTGGGT TGAGACCTAC
TTAAACTGCA AGGTTTGTGA TCAGTACGGA CAGACCGAGA CAGGAATGAC CTGCTGTGAG
CACCATGCAT TGGCACATGA CTGTCCAGTA GGCTCGATGG GCATGGCGCT ACCGGGGCAC
ACATTGGTGG TGTTAGATGA TGATATGAAT ATATTACCTG ATGGCGAGCA AGGACAGCTT
GCCGTAGTGG TCAGTCAATC GTCCGCGTTT TATTTCCGCG GCTATAGCTG GAATGAAAAA
GATGCCTTCG CTGATGACTA TTATTTAACA GGTGACGTGG TTGAGCGTCA TAGTGATGGC
AGCTATTGGT TTTCAGGGCG TGATGACGAC ATTATCATTA CAGCAGGTTA CCGCGTTGGA
CCAACCGATG TTGAAAACAC AGTGCTTGAG CATGAGGCAG TCGCAGAGTC AGCGGCAGTT
GGGGTGCCAG ACGAAGTGCG TGGTCATACC ATTAAGTCTT ATGTGGTGCT AAAAGATGGT
ATCAAAGGCA CAGACGAGAT TGCTAAAGAG ATTCAAGACT TGGTACGCAG GCGTCTATCA
ACTCATGCTT ATCCACGTGA GGTTGAGTTT GTGAAAGAGT TACCAAAAAC CCCAAGTGGT
AAAATTCAGC GCTTTTTGCT GCGCAGTTTA TCTGCGGCTT AA
 
Protein sequence
MNTSPSSTTS LNTPSNHAVN TSQALTSYSD YYNNFDMNAL LTEIFGENVD DRLNAYMACC 
GRHVRDGRGD NIALVHEDTA GNVTRMSFAE LDKASAQVAS LLLSYGVQAG DQVATMLPRT
PELLTIVLAT WRIGAVYQPL FTAFGYDSIK YRMDKANTKV VFTNQDNRGK FDDLAKQTKM
VLVGSKVDAQ SWGDDNYADK ISKQPQTIES VLLNTDAPFL QMFTSGTVGK SKGVSVPLSA
LSAFYLYMRY AIDLRADDNY WNMADPGWAY GLYYAITGPL LLGITTYFNE AGFDAANTRD
FMVRHKISNL ASSPTAFRMM KSSGVFEAAH NDAAAKLSLR CANSAGETLN TEVVNWVETY
LNCKVCDQYG QTETGMTCCE HHALAHDCPV GSMGMALPGH TLVVLDDDMN ILPDGEQGQL
AVVVSQSSAF YFRGYSWNEK DAFADDYYLT GDVVERHSDG SYWFSGRDDD IIITAGYRVG
PTDVENTVLE HEAVAESAAV GVPDEVRGHT IKSYVVLKDG IKGTDEIAKE IQDLVRRRLS
THAYPREVEF VKELPKTPSG KIQRFLLRSL SAA