Gene Pcryo_0826 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_0826 
Symbol 
ID4033850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp976604 
End bp977872 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content45% 
IMG OID637973291 
Productradical SAM family protein 
Protein accessionYP_580093 
Protein GI93005656 
COG category[R] General function prediction only 
COG ID[COG4277] Predicted DNA-binding protein with the Helix-hairpin-helix motif 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.243039 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGCAACCA TCAATTATGA ACGACTACAA GGTAAGCTCA ATATTTTAGC GGACGCTGCT 
AAGTATGATG TCTCTTGCTC ATCCTCCGCT GGTACGCGGA AAAACCAAGG CGGTGGCCTT
GGCGATGCCT CAGCAACCGG TATTTGTCAC AGCTATACCG AAGATGGTCG CTGCGTTAGC
CTGCTGAAAA TCCTGCTGAC CAATCATTGC ATATATGATT GCGCTTATTG CACCTCGCGT
AAAAGCAATG ACACCCCGCG CGCTGCTTTT AGTGTTGAAG AAGTGGTTGA TTTAACTATG
CAGTTTTACC GCCGTAACTA TATCGAAGGG CTGTTTCTCA GCTCAGGTAT TTTTAAAAGT
GGCGATTATA CGATGGAGCG ATTGGTCGAG GTTGCAAAGA TATTGCGTAC CCGTGAGCGT
TTTAATGGTT ATATTCATCT AAAGACCATT CCCGGAGCTT CAAAAGAATT ATTATTAGAA
GCTGGATTAT ATGCTGACCG TTTAAGCGTC AATATCGAAA TTCCGACTAA ATCAGGATTG
GCGTTACTGG CACCAGAAAA ATCTCACGAA CAATTAAAAG CACCGATGGA GACGGTCAAA
GAAGAAATCA TCACCATTCG TGAGAGCCGT AAAACGCATA AAAAAGCGCC GAAATTTGTG
CCTGCAGGTC AGACTAGCCA GATGATTGTT GGCGCAAGTA ACGAGACCGA CTTGCAAGTG
ATTCAGCTAT CGAGTCATTT TTATAAACAC TATGATTTAA AACGAGTTTA CTATTCTGGC
TATGTGCCAA TGCTATCTGA CAGTCGCCTG CCAGCTATCG GTACGCCTGT GCCAATGATA
CGCGAAAACC GTCTCTATCA AGCGGATTGG CTGATGCGTT TTTATGGTTT TGGCGCGCAC
GAAATCGTTG AACCGGACTC GCCATTTTTA GATTTGGACT GCGACCCAAA GTTAGCATGG
GCAATCCGCC ACCGTGATCA TTTTCCGGTC AATATCCAAA CAGCAAGTTA TGAGATGATT
GTCCGTATTC CCGGTATCGG TACAAAAACG GCTAAAAAAA TAGTCAAAGC CCGCAAGTTT
AATCAGCTCA CACTTTATCA CTTGAAGAAA ATGGGCGCGG CGGTCAATCG CGCCAAATAC
TTCATTGCAA CTACTGGTAA AAACGAGCAT CTCGCACACT TAACCTGTGA CAACTTTCGT
CAATATGTGC TGGCGCAAAC GCAGACGAAA TTTAAAGATC AACGCAGTGG ACAGTTGGCT
TTGTTTTAA
 
Protein sequence
MATINYERLQ GKLNILADAA KYDVSCSSSA GTRKNQGGGL GDASATGICH SYTEDGRCVS 
LLKILLTNHC IYDCAYCTSR KSNDTPRAAF SVEEVVDLTM QFYRRNYIEG LFLSSGIFKS
GDYTMERLVE VAKILRTRER FNGYIHLKTI PGASKELLLE AGLYADRLSV NIEIPTKSGL
ALLAPEKSHE QLKAPMETVK EEIITIRESR KTHKKAPKFV PAGQTSQMIV GASNETDLQV
IQLSSHFYKH YDLKRVYYSG YVPMLSDSRL PAIGTPVPMI RENRLYQADW LMRFYGFGAH
EIVEPDSPFL DLDCDPKLAW AIRHRDHFPV NIQTASYEMI VRIPGIGTKT AKKIVKARKF
NQLTLYHLKK MGAAVNRAKY FIATTGKNEH LAHLTCDNFR QYVLAQTQTK FKDQRSGQLA
LF