Gene Pcryo_0798 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_0798 
Symbol 
ID4033743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp940904 
End bp942172 
Gene Length1269 bp 
Protein Length422 aa 
Translation table11 
GC content45% 
IMG OID637973263 
ProductO-succinylhomoserine sulfhydrylase 
Protein accessionYP_580065 
Protein GI93005628 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0626] Cystathionine beta-lyases/cystathionine gamma-synthases 
TIGRFAM ID[TIGR01325] O-succinylhomoserine sulfhydrylase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.40297 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGTCAAC CGCAAAATAA AGACAATATA AACGGCTTGG ATGCAAACTG GTGCAATGAT 
GCACTGGATT TAGAACTCGA TTATGGTATG CAAACCATTG CAGTACGTGC AGGTCAGCAT
CGTACCGATG AGGGCGAACA TTCAGAAGCT ATTTTTACGA CCAGCTCTTA TGTATATAGC
TCAGCAGCTG ATGCTGCCGG TCATTTTGAT GGCACTAAAA CGGGCAATGT CTACTCACGT
CATACCAATC CAAGCGTACG TACCTTTGAG CGCCGTTTAG CAGCACTTGA AAATGGTGAG
CGTGCAGTCG CAACAGCCTC TGGCATGGGT GCGATTTTGA CCATGTGCTT GGCGTACTTA
AAAGCCGGTA ACCATTTACT TGCTGCTAAT CAGCTATTTG GCTCCTCTAT TGGTTTGTTT
AATAACTATA TGGCAAAGTT TGGTGTGGAA GTCAGTTACG TTGATTGTTT CGATAATGAC
GCATGGGCAA ATGCTGTTCA ACCAAATACC AAGGTGATTT ATTGCGAAAG CCCTAGTAAT
CCATTGGCAC AGATTTGTGA TATTGGCTTT TTAAGCCAGC TATGTAAAGC CAATGATATA
CTCTTGGTCG TTGACAACTG CTTTGCCACC CCAGCTTTGC AACGTCCGCT TGATTTGGGT
GCCGATGTGG TGATTCATTC TGCAACCAAA TATTTAGACG GTCAGGGTCG AGTACTTGGT
GGCGCGTTAG TCGGTAGTGA TAAGTTGATG CAAGAAGCGT TTACCGTCAT ACGTTCAGGT
GGCATCAGCA TGAGTCCGTT TAATGCTTGG GTGTTTACCA AGGGACTTGA AACGCTTAAA
TTACGTATGC AAGCGCATTG TAGTAATGCC AATCAAGTGG CAGAGTTTTT GGTTAATCAT
CCCAATGTCA GCACCGTACA CTTTTCAGGC TTGAGCGACC ATCCATCGCA TGAGTTGACC
AAGCGTCAGC ATCATATGAA AGACGGCTTT GGAGCCATTA TGGGTTTTGA AGTGCAGCCA
TCAGAGACGC GTGATTCAAA ATCTGCCGCA TGGCATGTCA TTGATTCAAC TCAAATGGTC
TCTATCACCA ATAATTTGGG TGATGCGAAA ACCACGATTA CCCATCCTGC AACAACGACC
CATTTTCGTT TGAGCGCCCA AGAGCGCGCA GAAGCAGGCG TAAAAGACGG TCTTATTCGT
CTGTCGGTCG GTCTAGAAGA TGTAGAAGAT ATCATCAAAG ATTTGGCGCG TGGTTTAGAC
AGTTTGTAA
 
Protein sequence
MSQPQNKDNI NGLDANWCND ALDLELDYGM QTIAVRAGQH RTDEGEHSEA IFTTSSYVYS 
SAADAAGHFD GTKTGNVYSR HTNPSVRTFE RRLAALENGE RAVATASGMG AILTMCLAYL
KAGNHLLAAN QLFGSSIGLF NNYMAKFGVE VSYVDCFDND AWANAVQPNT KVIYCESPSN
PLAQICDIGF LSQLCKANDI LLVVDNCFAT PALQRPLDLG ADVVIHSATK YLDGQGRVLG
GALVGSDKLM QEAFTVIRSG GISMSPFNAW VFTKGLETLK LRMQAHCSNA NQVAEFLVNH
PNVSTVHFSG LSDHPSHELT KRQHHMKDGF GAIMGFEVQP SETRDSKSAA WHVIDSTQMV
SITNNLGDAK TTITHPATTT HFRLSAQERA EAGVKDGLIR LSVGLEDVED IIKDLARGLD
SL