Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_0748 |
Symbol | |
ID | 4033636 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | + |
Start bp | 880839 |
End bp | 881597 |
Gene Length | 759 bp |
Protein Length | 252 aa |
Translation table | 11 |
GC content | 41% |
IMG OID | 637973213 |
Product | integrase catalytic subunit |
Protein accession | YP_580015 |
Protein GI | 93005578 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG2801] Transposase and inactivated derivatives |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.401665 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.472913 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCATGCAT TAAAAGCTGA TGATAAGTAT GCCGATCTTA AACAGCGTAT CAGTGACATC TATCATTACC ATAAAGGTCG ATATGGCTAT CGTAGAATCA CTCAAACGCT TAAGAACGAA GGAATAAGAT ACAACCACAA GCTCATCGCA CGGCTTATGA ACGAGCTTAA ACTTACCGCG AGAATCAGAC GACAGAAGTA TCGATCCTAT AAAGGTCAGT GTGGCGTCAT TGCCAAGAAT AGAGTCAAAC GCAGGTTCAG AGCGAAAGCG CCCAATCGCA GGTGGTTTAC TGACATCACA GAGTTTAAAG TCGGTGATGA GAAGTTGTAT CTGTCTCCTA TACTAGACTG CTTCAACAAT GAGATCATCA GTTATACGCT CTCAAGACGA CCCGTATATG ACTTGGTGAA ACAGATGCTA GATAGTGCAC TTAAGGGCAT ACCTACAAAG CGCAAGGAGA CACTGACGCT GCATTCAGAT CAAGGGTGGC ACTATCAGAT AAAACCGTTT GCGACAACGC TTGAAACGCA TAAAATTAAA CAGAGTATGA GTAGAAAAGG CAACTGCTTA GACAATGCGC TGATGGAGAG CTTCTTCGGT ACGCTAAAAT GTGAAACTAT TTATATTGAA AAGCCATCGA GTATTGAGGC TTTAGAGAAA CAGATTCATA ACTTTATGCT CTACTACAAT CATGAGAGAA TTCAGATGAA ACTAAAAGGA CTAAGCCCTG TACAATACAG AACTCAGTCC TTGATTTAA
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Protein sequence | MHALKADDKY ADLKQRISDI YHYHKGRYGY RRITQTLKNE GIRYNHKLIA RLMNELKLTA RIRRQKYRSY KGQCGVIAKN RVKRRFRAKA PNRRWFTDIT EFKVGDEKLY LSPILDCFNN EIISYTLSRR PVYDLVKQML DSALKGIPTK RKETLTLHSD QGWHYQIKPF ATTLETHKIK QSMSRKGNCL DNALMESFFG TLKCETIYIE KPSSIEALEK QIHNFMLYYN HERIQMKLKG LSPVQYRTQS LI
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