| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_0652 |
|---|
| Symbol | ispG |
|---|
| ID | 4035489 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Psychrobacter cryohalolentis K5 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_007969 |
|---|
| Strand | + |
|---|
| Start bp | 771206 |
|---|
| End bp | 772321 |
|---|
| Gene Length | 1116 bp |
|---|
| Protein Length | 371 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 45% |
|---|
| IMG OID | 637973114 |
|---|
| Product | 4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase |
|---|
| Protein accession | YP_579919 |
|---|
| Protein GI | 93005482 |
|---|
| COG category | [I] Lipid transport and metabolism |
|---|
| COG ID | [COG0821] Enzyme involved in the deoxyxylulose pathway of isoprenoid biosynthesis |
|---|
| TIGRFAM ID | [TIGR00612] 1-hydroxy-2-methyl-2-(E)-butenyl 4-diphosphate synthase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 6 |
|---|
| Plasmid unclonability p-value | 0.042076 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGTCAACGT CAGCGCCTAT TAACCGTCGT CTTACGAAGA AAATATATGT CGGTGATGTC
GCGATTGGTG GTGATGCGCC GATTAGTGTG CAAAGTATGA CCAATACCGA TACCTGTGAT
GTGGCAGCGA CTGTTGCCCA AATTGAGCGC TGTGTTGAAG CAGGCGCTGA TTTGATGCGA
GTTTCTACTC CGACGATGGA TACCGTTAAA GCGTTTGGTG AAATTCGCAA GTTGGTCAGC
GTACCCTTGA TAGCAGATGT GCATTTTGAC CACAAAATTG CTTTAGCCGT TGCGGCAGCG
GGCGCAGATT GTTTACGTAT TAACCCGGGC AATATCGGTA GTGACGCCAA AGTACGCGAA
GTAGTCGCCT GTGCCAAGCA TTACAATATT CCTATTCGTA TCGGCGTCAA TGCTGGCTCA
TTAGAGAAAG ACATTCAGCG TAAGTATAAA GAGCCAAATG GCGCAGCGAT GCTCGAATCG
GCAATGCGTC ATATTGATAT ATTAGAACGT CTTAATTTTG ATCAATATAA AGTATCGGTT
AAAGCCAGCA ACGTATTTTT GACCATGGAT GCCTATCGTC TGATTTCAGC ACAAATTGAT
AATCCGCTGC ATTTAGGGGT GACTGAAGCT GGTGTTTACC GTACTGGTTC GGTCAAATCT
GCTATCGCGC TGGGTGGTTT ATTATTAGAC GGTATCGGTG ATACGATACG TATCTCCTTA
GCTGCAGAGC CAGAAGAAGA AATTAAGATT GGCTTTGATA TCTTAAAATC GCTCAATATT
CGCTCTAATG GTGTCAATTT CATTGCTTGT CCAAGCTGCT CACGTCAAGA GTTCGACGTG
ATTAGAGTGA TGACCGCGTT AGAGTCGCGC TTAGAAGACA TTCGTGAGCC GATGAATTTG
TCAGTGATTG GCTGTAAGGT AAATGGTCCA GGTGAAGCGA AAGAAGCCGA TATCGGTATT
GTTGGCGCCG CACCAAAGTC TCTGGTCTAC CGTATGGGCG AAAAAAGTCA TCTGATTGAT
ACAGATAATT TGGTCGATGA GATAGAAGGT ATGGTACGCG CCCATGCAGA AGAATTGGCA
AAAAAACGCG AAAACGAGAT TATACGTGTT AGATAA
|
|---|
| Protein sequence | MSTSAPINRR LTKKIYVGDV AIGGDAPISV QSMTNTDTCD VAATVAQIER CVEAGADLMR
VSTPTMDTVK AFGEIRKLVS VPLIADVHFD HKIALAVAAA GADCLRINPG NIGSDAKVRE
VVACAKHYNI PIRIGVNAGS LEKDIQRKYK EPNGAAMLES AMRHIDILER LNFDQYKVSV
KASNVFLTMD AYRLISAQID NPLHLGVTEA GVYRTGSVKS AIALGGLLLD GIGDTIRISL
AAEPEEEIKI GFDILKSLNI RSNGVNFIAC PSCSRQEFDV IRVMTALESR LEDIREPMNL
SVIGCKVNGP GEAKEADIGI VGAAPKSLVY RMGEKSHLID TDNLVDEIEG MVRAHAEELA
KKRENEIIRV R
|
|---|
| |