Gene Pcryo_0624 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_0624 
Symbol 
ID4033934 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp743285 
End bp744382 
Gene Length1098 bp 
Protein Length365 aa 
Translation table11 
GC content40% 
IMG OID637973086 
ProductdTDP-glucose 4,6-dehydratase 
Protein accessionYP_579891 
Protein GI93005454 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG1088] dTDP-D-glucose 4,6-dehydratase 
TIGRFAM ID[TIGR01181] dTDP-glucose 4,6-dehydratase 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0728968 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAATTTC TGATAACGGG CGGTGCGGGT TTCATTGGTT CTGCTGTGGT AAGGCATTTG 
CTACAGCATA CACAAAACTC ACTTATGAAT CTTGATAAAC TTACTTATGC AGGTAATTTA
GAGTCATGTG ATCCAGTGAG TGATAATTCA CGCTATACAT TTGAACAAGT TGATATTTGC
AATCCTACTG AATTGGCTAG AGTCTTTGAA AGGTATCAGC CGGATGTGGT AATGCACTTA
GCTGCAGAAA GCCATGTTGA TCGCTCTATC GATGCACCTG ATGATTTTAT ACGAACCAAT
ATTGTTGGTA CTTATAATAT GTTAGAGGCA GCGCGTGCTT ACTGGAGTCA CTTAAGTTCT
GAGCGTAAAC AAATCTTTCG TTTTCATCAT ATAAGCACTG ACGAGGTTTA TGGTGACCTA
CCTCATCCCG ATAAGCTTGA AAACCCTAAT TCAGTAGGTG AATACCTATT TACTGAAACA
ACCTCTTATG CGCCTAGTTC TCCTTACTCT GCTAGTAAAG CAAGCTCTGA TCATCTAGTG
CGTGCTTGGT ATAGAACTTA TGGTCTACCT GTAGTTATAA CAAACTGTTC TAATAATTAT
GGACCTTATC ATTTTCCTGA AAAATTAGTT CCGCATATTA TTTTAAACGC ATTGGCTGGT
AAGTCTTTAC CGGTCTATGG TGACGGCAGC CAGATCCGTG ATTGGCTATA TGTAGAAGAT
CATGCCCGCG CTTTAATTAA AGTAGCAACT GAAGGCGTGG TTGGTGAGAC TTATAACATC
GGCGGTCATA ATGAAAAACG CAATATTGAT GTAGTACTTA TACTATGTGC GTTGCTTGAG
GAGATGGCTT CTGATCAGAA GCCCGCGGGT ATAGCTAAGT ACGAAGATTT AATTGTATTC
GTCAAAGATC GTGCAGGTCA TGATGTTCGT TACGCTATAG ATGCTAGTAA AATCGAACGT
GAATTAGACT GGGTTCCAGA AGAAAGCTTT GAAACCGGTA TGCGTAAAAC AGTGCAATGG
TATTTAGATA ATAAAAATTG GTGGCAGCGT GTGCTAAATG GAAGTTACCG CTTAGAACGA
TTGGGAGAGT ATAAATGA
 
Protein sequence
MKFLITGGAG FIGSAVVRHL LQHTQNSLMN LDKLTYAGNL ESCDPVSDNS RYTFEQVDIC 
NPTELARVFE RYQPDVVMHL AAESHVDRSI DAPDDFIRTN IVGTYNMLEA ARAYWSHLSS
ERKQIFRFHH ISTDEVYGDL PHPDKLENPN SVGEYLFTET TSYAPSSPYS ASKASSDHLV
RAWYRTYGLP VVITNCSNNY GPYHFPEKLV PHIILNALAG KSLPVYGDGS QIRDWLYVED
HARALIKVAT EGVVGETYNI GGHNEKRNID VVLILCALLE EMASDQKPAG IAKYEDLIVF
VKDRAGHDVR YAIDASKIER ELDWVPEESF ETGMRKTVQW YLDNKNWWQR VLNGSYRLER
LGEYK