| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Pcryo_0612 |
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| Symbol | |
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| ID | 4035660 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Psychrobacter cryohalolentis K5 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_007969 |
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| Strand | + |
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| Start bp | 728411 |
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| End bp | 730363 |
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| Gene Length | 1953 bp |
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| Protein Length | 650 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 637973074 |
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| Product | polysaccharide biosynthesis protein CapD |
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| Protein accession | YP_579879 |
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| Protein GI | 93005442 |
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| COG category | [G] Carbohydrate transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG1086] Predicted nucleoside-diphosphate sugar epimerases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.301721 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCCAATAG ACACATCAAT AATCTCTAAA AAAGATAAGA CCTCTCCTAT AGAGTCTAAT
GACTTTGCTG AGCGTACTGC TAAGATATTG CTGAATCTAC CTCGAGGCAT CAAGCGTAGT
ATTCTGATGA TGGCTGATTT TATCATGTCA GTGGTCTGTC TATTCTTTGC CGTAGCAGCG
CGCTACGGGT ATATAGACAA TCACGTGAGT TTATTATTAT TAAGCGTCAG TGCATTGATT
CCAGTATTAT GCTTATATGT AATTGGATTT TATAATGGCG TGGCACGAGG GTTCTTTGAT
GCGATGATGG GCAGTGTATT ACAACTTTTC TTTGTACTCA TCATCGTTGC CCAAACTGTT
TTATATTTTA AATTACTACC AGGTATTCCT CGTGCAGTAC CTATCTTGTA TTTATTTCTA
TTTTTTATAT GGCTGTGGAA TAGTCGCTTA ACGATTAGAG AGTTGCTAGC AAGGTGGCAA
GGTCAAAGAC CACAGTATAA GTATGATGAT TATGATAACG TTGTCATCTA TGGTGCAGGA
GAGGCCGGCA AAGAGCTCTT AGAAGGTTTA AGAAACTCTC ATAAGTATAA TGTCGTTGCT
TATGTCGATG ACGATCCGCA ATTGACAGGC GCTTATTTAC TCGGTAAACA AATTCACGCG
GCTTCTGACC TTATTGGGCT CGTAGGTAAA CTAGATATTG CCCAAGTTTT TTTAGCCATT
CCTTCTATCA GTCGGTCACG CAAACGCCAA ATCATTGATA AACTAGAAGG TATCTCTATT
AAAATCAAGG AATTGCCTAG CTTAGAAGAA ATCGCTGAAG AAAAAGTGAC TGTTAGTAGT
ATGCGTAGAG TGGATATATT AGATGTATTA GATCGGCAGA CAGTTGAACC TGACGTTAAT
CTTTTACAGC AAAATATTAC GGGTAAAAGT GTACTGGTGA CAGGCGCTGG TGGATCTATC
GGTAGCGAAT TGTGTCGTCA AATTATTAAG AATAAGCCTA AATGCTTGGT ACTATATGAA
TTATCTGAGT ACGCGCTTTA TACGATTGAT CAAGAGTTGA CGGCGAAAAA AGCTAAAAAT
AAAGACGACC ATGCTATAGA GATCGTTGCC ATTATTGGCA ATGTGACCAA CGAAGACAAC
TTGCTGCGTA TATTGAACCT CTATCAAATA CAGACGGTCT ATCATGCGGC TGCTTATAAA
CACGTCCCCA TCGTAGAGCA TAATCCGTTT GAAGGTGTGA TTAATAATAG TAAAGGCACC
TATCACTGTG CGCGTGCCGC GATACAAGCG AAGGTTGACA CCTTTGTACT GATCTCCACC
GACAAAGCAG TCAGACCGAC TAATATAATG GGAGCATCTA AGCGTTTAGC AGAGTTAGTC
TGTCAAGGGC TTAGTATGAC GACGGCTCAT ACTTGTATCA GTATGGTGCG CTTCGGCAAT
GTGCTTGGGT CCTCAGGCTC GGTAGTCCCT GTGTTTACGA AGCAGATAGA ACAGGGGCGA
CCTATTACGG TTACTCATCC TGATGTTACA CGTTATTTTA TGACGATTCC TGAAGCCGCC
AATCTAGTGA TTCAAGCAGG GGCGATGGCA AAAGGCGGTG AAGTATTCGT TTTGGATATG
GGTGAACCAG TCAAAATCGT CGATTTAGCA CGTCGTATGA TTCATTTAAG TGGACACAGA
GCAAAGACTA ATGATAATCC TAACGGCGAT ATAGAGATAA TTTTTACTGG TTTGAGACCA
GGTGAAAAGC TATACGAAGA GTTGATCATC GGTGAGGATA ATATCGAAAA TACTCATCAT
CCACTGATCA TGCAAGCGAT AGAGCATAGC TTTCCATTAG ATGAGCTTGA ATCGCTACTG
GCTGAGCTCA CTGAAAAGCA AAAAGAGTTT GACGTTGCTT GGTTAAAGCA GCAGTTTAAG
CAGTTTGTAG ATGGTTATAG ACAAGGTTCT TAG
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| Protein sequence | MPIDTSIISK KDKTSPIESN DFAERTAKIL LNLPRGIKRS ILMMADFIMS VVCLFFAVAA
RYGYIDNHVS LLLLSVSALI PVLCLYVIGF YNGVARGFFD AMMGSVLQLF FVLIIVAQTV
LYFKLLPGIP RAVPILYLFL FFIWLWNSRL TIRELLARWQ GQRPQYKYDD YDNVVIYGAG
EAGKELLEGL RNSHKYNVVA YVDDDPQLTG AYLLGKQIHA ASDLIGLVGK LDIAQVFLAI
PSISRSRKRQ IIDKLEGISI KIKELPSLEE IAEEKVTVSS MRRVDILDVL DRQTVEPDVN
LLQQNITGKS VLVTGAGGSI GSELCRQIIK NKPKCLVLYE LSEYALYTID QELTAKKAKN
KDDHAIEIVA IIGNVTNEDN LLRILNLYQI QTVYHAAAYK HVPIVEHNPF EGVINNSKGT
YHCARAAIQA KVDTFVLIST DKAVRPTNIM GASKRLAELV CQGLSMTTAH TCISMVRFGN
VLGSSGSVVP VFTKQIEQGR PITVTHPDVT RYFMTIPEAA NLVIQAGAMA KGGEVFVLDM
GEPVKIVDLA RRMIHLSGHR AKTNDNPNGD IEIIFTGLRP GEKLYEELII GEDNIENTHH
PLIMQAIEHS FPLDELESLL AELTEKQKEF DVAWLKQQFK QFVDGYRQGS
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