Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Pcryo_0589 |
Symbol | |
ID | 4035289 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Psychrobacter cryohalolentis K5 |
Kingdom | Bacteria |
Replicon accession | NC_007969 |
Strand | + |
Start bp | 703337 |
End bp | 704212 |
Gene Length | 876 bp |
Protein Length | 291 aa |
Translation table | 11 |
GC content | 43% |
IMG OID | 637973051 |
Product | MscS mechanosensitive ion channel |
Protein accession | YP_579856 |
Protein GI | 93005419 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0668] Small-conductance mechanosensitive channel |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.516163 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGAATTTT TAGGTTTTAC CCTTGATGTT GCCACTTTAA CCAATAACGC TTTGAGTATT GCTGCTAAAG TGGCATTAGC GCTACTAATA TTTATGATAG GGCGCTGGCT TGCCAAAAAA GCCGTCACAT TTGCTCACGG TATGATGTTG CGTAGTCGTT TAGATGAGAC AGTCGCTAGT TTTTTAGGTC GCTTAATTTA CGGTGTGCTA TTGGTTGTGG TCGTTTTGGC TGCCTTGAGT AAAGTTGGTG TGCAGACCAC TTCAGTCGTG GCTATCTTGG GTGGTGCAGC GGTTGCGATT GGTTTATCAC TGAAAGATCA GCTGTCTAAT TTTGCAGCGG GCATTATGAT TGTCACCTTT CGCCCCTTTG TGCGCGGTGA TTATGTGCAA ATAAGCAGCT ATACGGGCAC TGTGACAGAG ATTACCTTGG TCAATACGCA TCTAACAACG ATTAACAATC ATGATGTCAT CATTCCTAAT AGCGATATCA CCACTTCAGC GGTTGTTAAT TACACCGCAT TGCCCAATCG CCGCGTCGAT ATCACCGTTG GTATTGGTTA TGATGCTGAT ATCAAAACTG CCAAAGATGT TATGCTAAAT TTGGCAATCA GTAATCCGAA GGCGTTTACT GATCCTGCAC CGGTTATTCG CGTCACTAAC TTGGGCGATA ACTCCGTTGA TTTAACTTTA AACGTTTGGA CGACTAATGA CGACTGGTGG TCAATGCAGT GCGATCTATT GGAACAGTTT AAATATGCAC TGGATGATAA TAAAATTGAT ATTCCGTTCC CGCAGCGTAA TGTCCATGTG AAAGGACTTG ACCAGATGAT TAATCAGATG GATCAGGCAC AAAAACTACT AACGAAAAAA GATTAG
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Protein sequence | MEFLGFTLDV ATLTNNALSI AAKVALALLI FMIGRWLAKK AVTFAHGMML RSRLDETVAS FLGRLIYGVL LVVVVLAALS KVGVQTTSVV AILGGAAVAI GLSLKDQLSN FAAGIMIVTF RPFVRGDYVQ ISSYTGTVTE ITLVNTHLTT INNHDVIIPN SDITTSAVVN YTALPNRRVD ITVGIGYDAD IKTAKDVMLN LAISNPKAFT DPAPVIRVTN LGDNSVDLTL NVWTTNDDWW SMQCDLLEQF KYALDDNKID IPFPQRNVHV KGLDQMINQM DQAQKLLTKK D
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