Gene Pcryo_0589 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagPcryo_0589 
Symbol 
ID4035289 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism namePsychrobacter cryohalolentis K5 
KingdomBacteria 
Replicon accessionNC_007969 
Strand
Start bp703337 
End bp704212 
Gene Length876 bp 
Protein Length291 aa 
Translation table11 
GC content43% 
IMG OID637973051 
ProductMscS mechanosensitive ion channel 
Protein accessionYP_579856 
Protein GI93005419 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0668] Small-conductance mechanosensitive channel 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones10 
Plasmid unclonability p-value0.516163 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGAATTTT TAGGTTTTAC CCTTGATGTT GCCACTTTAA CCAATAACGC TTTGAGTATT 
GCTGCTAAAG TGGCATTAGC GCTACTAATA TTTATGATAG GGCGCTGGCT TGCCAAAAAA
GCCGTCACAT TTGCTCACGG TATGATGTTG CGTAGTCGTT TAGATGAGAC AGTCGCTAGT
TTTTTAGGTC GCTTAATTTA CGGTGTGCTA TTGGTTGTGG TCGTTTTGGC TGCCTTGAGT
AAAGTTGGTG TGCAGACCAC TTCAGTCGTG GCTATCTTGG GTGGTGCAGC GGTTGCGATT
GGTTTATCAC TGAAAGATCA GCTGTCTAAT TTTGCAGCGG GCATTATGAT TGTCACCTTT
CGCCCCTTTG TGCGCGGTGA TTATGTGCAA ATAAGCAGCT ATACGGGCAC TGTGACAGAG
ATTACCTTGG TCAATACGCA TCTAACAACG ATTAACAATC ATGATGTCAT CATTCCTAAT
AGCGATATCA CCACTTCAGC GGTTGTTAAT TACACCGCAT TGCCCAATCG CCGCGTCGAT
ATCACCGTTG GTATTGGTTA TGATGCTGAT ATCAAAACTG CCAAAGATGT TATGCTAAAT
TTGGCAATCA GTAATCCGAA GGCGTTTACT GATCCTGCAC CGGTTATTCG CGTCACTAAC
TTGGGCGATA ACTCCGTTGA TTTAACTTTA AACGTTTGGA CGACTAATGA CGACTGGTGG
TCAATGCAGT GCGATCTATT GGAACAGTTT AAATATGCAC TGGATGATAA TAAAATTGAT
ATTCCGTTCC CGCAGCGTAA TGTCCATGTG AAAGGACTTG ACCAGATGAT TAATCAGATG
GATCAGGCAC AAAAACTACT AACGAAAAAA GATTAG
 
Protein sequence
MEFLGFTLDV ATLTNNALSI AAKVALALLI FMIGRWLAKK AVTFAHGMML RSRLDETVAS 
FLGRLIYGVL LVVVVLAALS KVGVQTTSVV AILGGAAVAI GLSLKDQLSN FAAGIMIVTF
RPFVRGDYVQ ISSYTGTVTE ITLVNTHLTT INNHDVIIPN SDITTSAVVN YTALPNRRVD
ITVGIGYDAD IKTAKDVMLN LAISNPKAFT DPAPVIRVTN LGDNSVDLTL NVWTTNDDWW
SMQCDLLEQF KYALDDNKID IPFPQRNVHV KGLDQMINQM DQAQKLLTKK D